RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NMBP08949 121 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 AKR1C8PQ5T2L2 129 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 CMTM2Q8TAZ6 248 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 ST6GAL2Q96JF0 529 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 VGLL1Q99990 258 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 ZNF492Q9P255 531 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 IGKV2-40A0A087WW87 121 aaPredicted RBP7.65□□□□□ -1.18
LINC00239-201ENST00000556973 TRBV7-9A0A0J9YWB2 115 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 KANTRA0A1W2PQU2 76 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 IGKV2D-40P01614 121 aaPredicted RBP7.65□□□□□ -1.18
LINC00239-201ENST00000556973 PRM2P04554 102 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 HTN1P15515 57 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 CRISP2P16562 243 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 AZU1P20160 251 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 GCHFRP30047 84 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 ZNF138P52744 262 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 KIR3DS1Q14943 382 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 C12orf74Q32Q52 190 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 FAM222AQ5U5X8 452 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 TCTE3Q8IZS6 198 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 HYLS1Q96M11 299 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 NIPSNAP3BQ9BS92 247 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 DKK2Q9UBU2 259 aa7.65□□□□□ -1.18
LINC00239-201ENST00000556973 YTHDF2Q9Y5A9 579 aaKnown RBP7.65□□□□□ -1.18
LINC00239-201ENST00000556973 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 LCE6AA0A183 80 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 CTXND1A0A1B0GTU2 59 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 C7orf71A4D174 169 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 KLLNB2CW77 178 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 J3KRW8 73 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 BCL2L11O43521 198 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 ZNF324O75467 553 aaPredicted RBP7.64□□□□□ -1.19
LINC00239-201ENST00000556973 GPX1P07203 203 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 SEC11BP0C7V7 166 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 TCTAP57738 103 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
LINC00239-201ENST00000556973 ZNF493Q6ZR52 646 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 Q6ZTC4 211 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 TMUB2Q71RG4 321 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 CCDC28AQ8IWP9 274 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 TMED6Q8WW62 240 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 C16orf74Q96GX8 76 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 PYGO2Q9BRQ0 406 aa7.64□□□□□ -1.19
LINC00239-201ENST00000556973 LYRM9A8MSI8 78 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 PFDN1O60925 122 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 CD300CQ08708 224 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 ZNF726P1Q15940 193 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 ZNF767PQ75MW2 155 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 SSX7Q7RTT5 188 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
LINC00239-201ENST00000556973 ZNF471Q9BX82 626 aaPredicted RBP7.63□□□□□ -1.19
LINC00239-201ENST00000556973 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
LINC00239-201ENST00000556973 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 SERTM2A0A1B0GWG4 89 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 PLAC8L1A1L4L8 177 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 IGLL5B9A064 214 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 UMAD1C9J7I0 102 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 C1QBP02746 253 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 RNASE4P34096 147 aaKnown RBP7.62□□□□□ -1.19
LINC00239-201ENST00000556973 SUMO1P63165 101 aaKnown RBP7.62□□□□□ -1.19
LINC00239-201ENST00000556973 BTN1A1Q13410 526 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 ZFAND2AQ8N6M9 145 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 RNASE8Q8TDE3 154 aaKnown RBP7.62□□□□□ -1.19
LINC00239-201ENST00000556973 LINC00467Q9BRT7 94 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 RPH3ALQ9UNE2 315 aa7.62□□□□□ -1.19
LINC00239-201ENST00000556973 TIMM8BQ9Y5J9 83 aaPredicted RBP7.62□□□□□ -1.19
LINC00239-201ENST00000556973 STARD9Q9P2P6 4700 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 K7EQM0 130 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 DAD1P61803 113 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 LGALSLQ3ZCW2 172 aaPredicted RBP7.61□□□□□ -1.19
LINC00239-201ENST00000556973 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 AKAP14Q86UN6 197 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 IQCF2Q8IXL9 164 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 C5orf17Q8NAS9 161 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 Q8TAT8 98 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 STOML3Q8TAV4 291 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 NKX6-2Q9C056 277 aaPredicted RBP7.61□□□□□ -1.19
LINC00239-201ENST00000556973 EPDR1Q9UM22 224 aa7.61□□□□□ -1.19
LINC00239-201ENST00000556973 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 MAP1LC3B2A6NCE7 125 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 TCRAP04437 139 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 TPT1P13693 172 aaKnown RBP7.6□□□□□ -1.19
LINC00239-201ENST00000556973 FGF8P55075 233 aaPredicted RBP7.6□□□□□ -1.19
LINC00239-201ENST00000556973 GNG5P63218 68 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 MAP1LC3BQ9GZQ8 125 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 TMPRSS5Q9H3S3 457 aa7.6□□□□□ -1.19
LINC00239-201ENST00000556973 KMT2CQ8NEZ4 4911 aaKnown RBP7.59□□□□□ -1.19
LINC00239-201ENST00000556973 IGHV4-4A0A075B6R2 117 aa7.59□□□□□ -1.19
LINC00239-201ENST00000556973 FBLL1A6NHQ2 334 aaKnown RBP7.59□□□□□ -1.19
LINC00239-201ENST00000556973 CBY3A6NI87 242 aa7.59□□□□□ -1.19
LINC00239-201ENST00000556973 FAM74A7A6NL05 159 aa7.59□□□□□ -1.19
LINC00239-201ENST00000556973 SNURFLB1AK76 121 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms