RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 RANP62826 216 aaKnown RBP7.37□□□□□ -1.23
SNX6-208ENST00000556712 BTN1A1Q13410 526 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 ZNF266Q14584 549 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 PRR9Q5T870 116 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 RPL7L1Q6DKI1 246 aaKnown RBP7.37□□□□□ -1.23
SNX6-208ENST00000556712 OR10G4Q8NGN3 311 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 OR10G9Q8NGN4 311 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 OR10G7Q8NGN6 311 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 Q8TAT8 98 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 ASB13Q8WXK3 278 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 ODF3Q96PU9 254 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 RPH3ALQ9UNE2 315 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
SNX6-208ENST00000556712 TEX48A0A1B0GUV7 120 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 A0A1W2PPV4 95 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 CDC34P49427 236 aaPredicted RBP7.36□□□□□ -1.23
SNX6-208ENST00000556712 CD300CQ08708 224 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 LGALS9CQ6DKI2 356 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 INO80EQ8NBZ0 244 aaPredicted RBP7.36□□□□□ -1.23
SNX6-208ENST00000556712 RNASE8Q8TDE3 154 aaKnown RBP7.36□□□□□ -1.23
SNX6-208ENST00000556712 C16orf74Q96GX8 76 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 FAM19A4Q96LR4 140 aa7.36□□□□□ -1.23
SNX6-208ENST00000556712 C7orf71A4D174 169 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 KLLNB2CW77 178 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 ARPC5O15511 151 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 ARL14EPLP0DKL9 152 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 TMEM78Q5T7P6 136 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 Q6ZQT7 251 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 C9orf47Q6ZRZ4 202 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 SSX7Q7RTT5 188 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 OR2G3Q8NGZ4 309 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 TMEM263Q8WUH6 116 aaKnown RBP7.35□□□□□ -1.23
SNX6-208ENST00000556712 HYLS1Q96M11 299 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 C20orf144Q9BQM9 153 aa7.35□□□□□ -1.23
SNX6-208ENST00000556712 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
SNX6-208ENST00000556712 SLC25A5P05141 298 aaKnown RBP7.34□□□□□ -1.23
SNX6-208ENST00000556712 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
SNX6-208ENST00000556712 TCTAP57738 103 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 GNG5P63218 68 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 TMEM88Q6PEY1 159 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 ZFAND2AQ8N6M9 145 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 LINC00477Q96M19 166 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 NDUFAF3Q9BU61 184 aa7.34□□□□□ -1.23
SNX6-208ENST00000556712 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
SNX6-208ENST00000556712 PGPA6NDG6 321 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 DIRC3C9JPN6 131 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 GPX1P07203 203 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 STAG3L2P0CL84 134 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 STAG3L3P0CL85 134 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 CRISP2P16562 243 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 CSN1S1P47710 185 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 ZNF138P52744 262 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 PQLC2Q6ZP29 291 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 LYPD1Q8N2G4 141 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 OTORQ9NRC9 128 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 ZNF492Q9P255 531 aa7.33□□□□□ -1.24
SNX6-208ENST00000556712 TIMM8BQ9Y5J9 83 aaPredicted RBP7.33□□□□□ -1.24
SNX6-208ENST00000556712 EPPK1P58107 5090 aaKnown RBP7.32□□□□□ -1.24
SNX6-208ENST00000556712 BORCS7-ASMTA0A0B4J1R7 106 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 RBAKDNA6NC62 111 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 ZNF324O75467 553 aaPredicted RBP7.32□□□□□ -1.24
SNX6-208ENST00000556712 ZNF493Q6ZR52 646 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 GOLT1AQ6ZVE7 132 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 CCDC28AQ8IWP9 274 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 CMTM2Q8TAZ6 248 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 PYGO2Q9BRQ0 406 aa7.32□□□□□ -1.24
SNX6-208ENST00000556712 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GAGE12BA1L429 117 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 CBY3A6NI87 242 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 F5H768 121 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GAGE7O76087 117 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GAGE12FP0CL80 117 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GAGE12GP0CL81 117 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GAGE12IP0CL82 117 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GCHFRP30047 84 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 SERF2P84101 59 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 ZNF726P1Q15940 193 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 IQCF2Q8IXL9 164 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 C11orf72Q8NBR9 251 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 OR11H4Q8NGC9 324 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GNPNAT1Q96EK6 184 aaPredicted RBP7.31□□□□□ -1.24
SNX6-208ENST00000556712 SGK494Q96LW2 274 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 CYTL1Q9NRR1 136 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 TP53TG3Q9ULZ0 132 aa7.31□□□□□ -1.24
SNX6-208ENST00000556712 SNURFLB1AK76 121 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 F6UZH7 168 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 RGS13O14921 159 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 MBP02144 154 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 ATP5G1P05496 136 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 ATP5G3P48201 142 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 FAM74A1Q5RGS3 127 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 MUC21Q5SSG8 566 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 Q6ZTI0 123 aa7.3□□□□□ -1.24
SNX6-208ENST00000556712 EIF4E3Q8N5X7 224 aaKnown RBP7.3□□□□□ -1.24
SNX6-208ENST00000556712 RXFP4Q8TDU9 374 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms