RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZNF266Q14584 549 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 TIGITQ495A1 244 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 BCL2L15Q5TBC7 163 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM244Q5VVB8 128 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SPATA31B1PQ5VZV4 182 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF773Q6PK81 442 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
PRPF39-209ENST00000556353 HIST3H2BBQ8N257 126 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SIGLECL1Q8N7X8 197 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SUMF2Q8NBJ7 301 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SLC25A40Q8TBP6 338 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 KLF14Q8TD94 323 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-209ENST00000556353 BLNKQ8WV28 456 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 OR4C12Q96R67 309 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SEC11CQ9BY50 192 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM222Q9H0R3 208 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 RNASE7Q9H1E1 156 aaKnown RBP2.83□□□□□ -1.96
PRPF39-209ENST00000556353 BANF2Q9H503 90 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 RPRMQ9NS64 109 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 POMPQ9Y244 141 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 A0A0B4J2A0 478 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 IGHV3-64DA0A0J9YX35 117 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 C5orf63A6NC05 138 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 RBFOX3A6NFN3 312 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 H7BYZ3 331 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 K7EMT4 169 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 NCR2O95944 276 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 CSN2P05814 226 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 IGLL1P15814 213 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 PPIBP23284 216 aaKnown RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 TSPOP30536 169 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 DHRS2Q13268 280 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 HMGN3Q15651 99 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 RSPO1Q2MKA7 263 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 LRRC10Q5BKY1 277 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 FAM201AQ5SY85 155 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF684Q5T5D7 378 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 FAM27BQ5VT28 67 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 OR2T5Q6IEZ7 315 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF695Q8IW36 515 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 TTC9CQ8N5M4 171 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 OR2T29Q8NH02 315 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 C10orf82Q8WW14 230 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 CCL17Q92583 94 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 ERMAPQ96PL5 475 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 PITX2Q99697 317 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 HSD17B10Q99714 261 aaKnown RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 DERL1Q9BUN8 251 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 MRPL32Q9BYC8 188 aaKnown RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 RBKSQ9H477 322 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM106BQ9NUM4 274 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF586Q9NXT0 402 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 BET1LQ9NYM9 111 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 DNAJC27Q9NZQ0 273 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 SHPKQ9UHJ6 478 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 VAX2Q9UIW0 290 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 RIMS3Q9UJD0 308 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 MED31Q9Y3C7 131 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 MRPS16Q9Y3D3 137 aaKnown RBP2.82□□□□□ -1.96
PRPF39-209ENST00000556353 SORL1Q92673 2214 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
PRPF39-209ENST00000556353 DNAH10Q8IVF4 4471 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 BIRC6Q9NR09 4857 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 TRAV40A0A0B4J280 105 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 A0A0G2JND7 137 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 FAM236DA0A1B0GTK5 79 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 A0A1B0GW64 132 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF705EA8MWA4 302 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 KRTAP4-16G5E9R7 235 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 RER1O15258 196 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 IGHV3-48P01763 117 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 REG1AP05451 166 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 IGLC1P0CG04 106 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF728P0DKX0 622 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 FAM236CP0DP71 79 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 OR10J1P30954 320 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 GUCA1AP43080 201 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 GPM6AP51674 278 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 AQP4P55087 323 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 HERVK_113P61574 105 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 PRDX4Q13162 271 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 KHDC3LQ587J8 217 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 COA6Q5JTJ3 125 aaKnown RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 IBA57Q5T440 356 aaKnown RBP2.81□□□□□ -1.96
PRPF39-209ENST00000556353 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 Q6Q795 121 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 RASL11AQ6T310 242 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 BRD3OSQ6XYD6 125 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 OR5AS1Q8N127 324 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 OR51A4Q8NGJ6 313 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 OR8S1Q8NH09 359 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 ARPC1AQ92747 370 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 FMC1Q96HJ9 113 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 Q96M85 177 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 GGTLC1Q9BX51 225 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 POLR2J3Q9H1A7 115 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms