RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 HLA-DMBP28068 263 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 MEOX2P50222 304 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 EMP1P54849 157 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-237ENST00000556274 FFAR4Q5NUL3 377 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 FAM78BQ5VT40 261 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 LINC00322Q6ZN03 302 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-237ENST00000556274 BPIFA4PQ86YQ2 179 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 C17orf77Q96MU5 243 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 GPR82Q96P67 336 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 PFDN5Q99471 154 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 ATP5SQ99766 215 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 TMEM208Q9BTX3 173 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
ATXN3-237ENST00000556274 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 H3BRN7 92 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 ISLRO14498 428 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 OR7C2O60412 319 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 OR10J4P0C629 311 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 SPP1P10451 314 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 PSMB3P49720 205 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 PSG9Q00887 426 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 HIST1H1AQ02539 215 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 OPCMLQ14982 345 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 PSG3Q16557 428 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 GDF5OSQ5U4N7 250 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 MIR17HGQ75NE6 70 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 KIR2DL5BQ8NHK3 375 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
ATXN3-237ENST00000556274 MFFQ9GZY8 342 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
ATXN3-237ENST00000556274 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 H3BMM0 161 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 H3BQ15 152 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 ARPC5O15511 151 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 DUSP14O95147 198 aaKnown RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 PYYP10082 97 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 PLP1P60201 277 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 VWC2Q2TAL6 325 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 ACOT6Q3I5F7 207 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 SPATA31B1PQ5VZV4 182 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 FOXI2Q6ZQN5 318 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 IQCF2Q8IXL9 164 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 OR10G7Q8NGN6 311 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 OR10J6PQ8NGY7 276 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 GATAD1Q8WUU5 269 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 RPUSD4Q96CM3 377 aaKnown RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 PAXXQ9BUH6 204 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 SLC35B3Q9H1N7 401 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 OR51M1Q9H341 326 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 SAV1Q9H4B6 383 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-237ENST00000556274 KCNIP2Q9NS61 270 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 ZNF586Q9NXT0 402 aa3.38□□□□□ -1.87
ATXN3-237ENST00000556274 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 TRAV12-2A0A075B6T6 113 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 A0A0J9YX75 114 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 C3orf84H3BNL1 204 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 M0R2Z0 102 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 SCGB1D1O95968 90 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
ATXN3-237ENST00000556274 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
ATXN3-237ENST00000556274 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms