RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
NPC2-208ENST00000556009 ZNF331Q9NQX6 463 aaPredicted RBP12.39□□□□□ -0.43
NPC2-208ENST00000556009 PXMP4Q9Y6I8 212 aa12.39□□□□□ -0.43
NPC2-208ENST00000556009 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
NPC2-208ENST00000556009 H7BYZ3 331 aa12.38□□□□□ -0.43
NPC2-208ENST00000556009 RNASE8Q8TDE3 154 aaKnown RBP12.38□□□□□ -0.43
NPC2-208ENST00000556009 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
NPC2-208ENST00000556009 CYTL1Q9NRR1 136 aa12.38□□□□□ -0.43
NPC2-208ENST00000556009 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 BCL2L11O43521 198 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 TNP2Q05952 138 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 LINC00305Q7Z4B0 112 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 TMEM263Q8WUH6 116 aaKnown RBP12.37□□□□□ -0.43
NPC2-208ENST00000556009 RNF141Q8WVD5 230 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 SLC39A9Q9NUM3 307 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 LINC00588Q9Y4M8 146 aa12.37□□□□□ -0.43
NPC2-208ENST00000556009 HTN1P15515 57 aa12.36□□□□□ -0.43
NPC2-208ENST00000556009 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
NPC2-208ENST00000556009 Q6ZRG5 221 aa12.36□□□□□ -0.43
NPC2-208ENST00000556009 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
NPC2-208ENST00000556009 C9orf62Q8N4C0 152 aa12.36□□□□□ -0.43
NPC2-208ENST00000556009 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
NPC2-208ENST00000556009 PRB4P10163 310 aaPredicted RBP12.35□□□□□ -0.43
NPC2-208ENST00000556009 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 OR10J6PQ8NGY7 276 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 TMEM37Q8WXS4 190 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 ZNF471Q9BX82 626 aaPredicted RBP12.35□□□□□ -0.43
NPC2-208ENST00000556009 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
NPC2-208ENST00000556009 COX7A2P2O60397 106 aa12.34□□□□□ -0.43
NPC2-208ENST00000556009 FFAR4Q5NUL3 377 aa12.34□□□□□ -0.43
NPC2-208ENST00000556009 OR1L4Q8NGR5 311 aa12.34□□□□□ -0.43
NPC2-208ENST00000556009 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
NPC2-208ENST00000556009 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
NPC2-208ENST00000556009 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 GCSAMLQ5JQS6 135 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 C10orf113Q5VZT2 155 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 CCDC28AQ8IWP9 274 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
NPC2-208ENST00000556009 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
NPC2-208ENST00000556009 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
NPC2-208ENST00000556009 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
NPC2-208ENST00000556009 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
NPC2-208ENST00000556009 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 PRAC2D3DTV9 90 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 RXFP4Q8TDU9 374 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 PFDN5Q99471 154 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 Q9H8V8 135 aa12.32□□□□□ -0.44
NPC2-208ENST00000556009 H3BNG1 76 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 SLC17A3O00476 420 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 M6PRP20645 277 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 EIF5AP63241 154 aaKnown RBP12.31□□□□□ -0.44
NPC2-208ENST00000556009 GUK1Q16774 197 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 MORN5Q5VZ52 161 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 ODF3Q96PU9 254 aa12.31□□□□□ -0.44
NPC2-208ENST00000556009 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
NPC2-208ENST00000556009 H3BQ15 152 aa12.3□□□□□ -0.44
NPC2-208ENST00000556009 SNRPCP09234 159 aaKnown RBP12.3□□□□□ -0.44
NPC2-208ENST00000556009 SERF2P84101 59 aa12.3□□□□□ -0.44
NPC2-208ENST00000556009 OR5I1Q13606 314 aa12.3□□□□□ -0.44
NPC2-208ENST00000556009 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
NPC2-208ENST00000556009 OR2G3Q8NGZ4 309 aa12.3□□□□□ -0.44
NPC2-208ENST00000556009 NPIPB6E9PJ23 425 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 CT45A10P0DMU9 189 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
NPC2-208ENST00000556009 LEPP41159 167 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 STOML3Q8TAV4 291 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 UPK3BQ9BT76 320 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
NPC2-208ENST00000556009 SNURFLB1AK76 121 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 H3BTX0 84 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 ZNF253O75346 499 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
NPC2-208ENST00000556009 HOXA5P20719 270 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 RAB2AP61019 212 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
NPC2-208ENST00000556009 TTC32Q5I0X7 151 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 PYGO2Q9BRQ0 406 aa12.28□□□□□ -0.44
NPC2-208ENST00000556009 TRAV5A0A0B4J249 113 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 A0A1W2PPQ1 181 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 GAGE7O76087 117 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 MBP02144 154 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 MIR17HGQ75NE6 70 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 OR10G4Q8NGN3 311 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 OR10G9Q8NGN4 311 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 OR10G7Q8NGN6 311 aa12.27□□□□□ -0.45
NPC2-208ENST00000556009 MRPL53Q96EL3 112 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms