RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TAS2R60P59551 318 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 C9orf47Q6ZRZ4 202 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 ODF3Q96PU9 254 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 TUBA4BQ9H853 241 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 ZFP30Q9Y2G7 519 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 VWFP04275 2813 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 C9JCJ5 164 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 CD7P09564 240 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 MORN3Q6PF18 240 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-220ENST00000555634 APRG1Q8IVJ8 170 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 C1QTNF4Q9BXJ3 329 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 PSG8Q9UQ74 426 aa8.34□□□□□ -1.07
SHMT2-220ENST00000555634 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 F6UB75 175 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 G3V4G9 280 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
SHMT2-220ENST00000555634 APOC4P55056 127 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-220ENST00000555634 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 Q8TAT8 98 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 PRR25Q96S07 402 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 SRD5A3Q9H8P0 318 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
SHMT2-220ENST00000555634 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 TMEM218A2RU14 115 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 PRAC2D3DTV9 90 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 LTAP01374 205 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 IGKV3-20P01619 116 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 GPX1P07203 203 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 CDKN1BP46527 198 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 SRSF3P84103 164 aaKnown RBP8.32□□□□□ -1.08
SHMT2-220ENST00000555634 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 DAZAP1Q96EP5 407 aaKnown RBP8.32□□□□□ -1.08
SHMT2-220ENST00000555634 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 VGLL1Q99990 258 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 ZNF492Q9P255 531 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
SHMT2-220ENST00000555634 LOC102724200A0A096LPH7 203 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-220ENST00000555634 H3BMM0 161 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 INSP01308 110 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 ZNF705DP0CH99 300 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-220ENST00000555634 ZNF705BP0CI00 300 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-220ENST00000555634 ERCC8Q13216 396 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 ADIRFQ15847 76 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 TMEM183AQ8IXX5 376 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 AGPAT4-IT1Q9H0P7 198 aa8.31□□□□□ -1.08
SHMT2-220ENST00000555634 M0R036 132 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 FAM162BQ5T6X4 162 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 GDF5OSQ5U4N7 250 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 TRPT1Q86TN4 253 aaKnown RBP8.3□□□□□ -1.08
SHMT2-220ENST00000555634 SLC7A5P1Q8MH63 180 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 DEFB125Q8N687 156 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 TVP23CQ96ET8 276 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 IGF2BP2-AS1Q96M15 143 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 ASCL2Q99929 193 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 TMEM208Q9BTX3 173 aa8.3□□□□□ -1.08
SHMT2-220ENST00000555634 J3KRW8 73 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 GCGP01275 180 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 SVBPQ8N300 66 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 NHLRC2Q8NBF2 726 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
SHMT2-220ENST00000555634 AGRNO00468 2067 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 NOTCH3Q9UM47 2321 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 TRAV21A0A0B4J279 112 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 KIR2DL5BA0A0G2JN68 375 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 KIR2DL5BA0A0G2JPC4 375 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 C7orf71A4D174 169 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 B4DEV8 164 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 C9JQL5 133 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 M0R2Z0 102 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 SNAPINO95295 136 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 CA1P00915 261 aaPredicted RBP8.28□□□□□ -1.08
SHMT2-220ENST00000555634 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
SHMT2-220ENST00000555634 CRISP2P16562 243 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 RPL35AP18077 110 aaKnown RBP8.28□□□□□ -1.08
SHMT2-220ENST00000555634 DEFB1P60022 68 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 ZNF124Q15973 351 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
SHMT2-220ENST00000555634 KIR2DL5AQ8N109 375 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms