RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 LOC389332A0A1B0GUA5 103 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 LY6HO94772 140 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 UBE2E1P51965 193 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 MAP1LC3AQ9H492 121 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-209ENST00000555609 SPTA1P02549 2419 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 A0A1W2PRD5 423 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 A0A1W2PRF3 423 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 A0A1W2PRM7 423 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 NCR2O95944 276 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 C2orf91Q6ZV80 131 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
TUBB3-209ENST00000555609 NXT2Q9NPJ8 142 aaKnown RBP12.55□□□□□ -0.4
TUBB3-209ENST00000555609 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
TUBB3-209ENST00000555609 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 BUB3O43684 328 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 FGF6P10767 208 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-209ENST00000555609 LY6DQ14210 128 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 FAM106AQ4KMX7 169 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 Q6ZVH6 145 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
TUBB3-209ENST00000555609 ZFAND3Q9H8U3 227 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 POLEQ07864 2286 aa12.54□□□□□ -0.4
TUBB3-209ENST00000555609 IGHV3-23P01764 117 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 LOXL1Q08397 574 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-209ENST00000555609 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 NPYP01303 97 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 ORM1P02763 201 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 RNF185Q96GF1 192 aa12.53□□□□□ -0.4
TUBB3-209ENST00000555609 ZFP36P26651 326 aaKnown RBP12.52□□□□□ -0.41
TUBB3-209ENST00000555609 C15orf32Q32M92 178 aa12.52□□□□□ -0.41
TUBB3-209ENST00000555609 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
TUBB3-209ENST00000555609 CFAP46Q8IYW2 2715 aa12.52□□□□□ -0.41
TUBB3-209ENST00000555609 ABCA1O95477 2261 aa12.52□□□□□ -0.41
TUBB3-209ENST00000555609 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 A6NDN8 102 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
TUBB3-209ENST00000555609 FCER1GP30273 86 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 Q8TAT8 98 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 NDUFS7O75251 213 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 CACNG7P62955 275 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 HSD52Q0P140 79 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 BBC3Q96PG8 261 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-209ENST00000555609 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
TUBB3-209ENST00000555609 PRSS47A8MTI9 375 aa12.5□□□□□ -0.41
TUBB3-209ENST00000555609 CLEC3BP05452 202 aa12.5□□□□□ -0.41
TUBB3-209ENST00000555609 RBX1P62877 108 aa12.5□□□□□ -0.41
TUBB3-209ENST00000555609 SMIM15Q7Z3B0 74 aa12.5□□□□□ -0.41
TUBB3-209ENST00000555609 SMPXQ9UHP9 88 aa12.5□□□□□ -0.41
TUBB3-209ENST00000555609 A1L4Q6 167 aa12.49□□□□□ -0.41
TUBB3-209ENST00000555609 H3BRM9 83 aa12.49□□□□□ -0.41
TUBB3-209ENST00000555609 CDSNQ15517 529 aa12.49□□□□□ -0.41
TUBB3-209ENST00000555609 METTL26Q96S19 204 aa12.49□□□□□ -0.41
TUBB3-209ENST00000555609 PRB1P04280 392 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 HLA-DMBP28068 263 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 U3KQE9 123 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 CBY3A6NI87 242 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 TNFRSF6BO95407 300 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 RNASE8Q8TDE3 154 aaKnown RBP12.48□□□□□ -0.41
TUBB3-209ENST00000555609 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
TUBB3-209ENST00000555609 IGHV4-4A0A075B6R2 117 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 CLPSL1A2RUU4 121 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 C7orf71A4D174 169 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 EFNA4P52798 201 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 ECSCRQ19T08 205 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 Q8N8P6 123 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 LENEPQ9Y5L5 61 aa12.47□□□□□ -0.41
TUBB3-209ENST00000555609 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.41
TUBB3-209ENST00000555609 ATP5LO75964 103 aa12.46□□□□□ -0.41
TUBB3-209ENST00000555609 PRB4P10163 310 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-209ENST00000555609 ERCC8Q13216 396 aa12.46□□□□□ -0.41
TUBB3-209ENST00000555609 IGFL4Q6B9Z1 124 aa12.46□□□□□ -0.41
TUBB3-209ENST00000555609 PRAC2D3DTV9 90 aa12.46□□□□□ -0.42
TUBB3-209ENST00000555609 CCDC140Q96MF4 163 aa12.46□□□□□ -0.42
TUBB3-209ENST00000555609 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.42
TUBB3-209ENST00000555609 COL6A6A6NMZ7 2263 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 LEPP41159 167 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 CRIP2P52943 208 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-209ENST00000555609 IL17RELQ6ZVW7 336 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms