RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 NANOS2P60321 138 aaKnown RBP4.72□□□□□ -1.65
LINC00643-203ENST00000555518 GNG5P63218 68 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 GUCA2BQ16661 112 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 KRTAP24-1Q3LI83 254 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 CST9LP1Q5W188 147 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 ATRAIDQ6UW56 229 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 S100A7AQ86SG5 101 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 OR8I2Q8N0Y5 310 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 EXOC3-AS1Q8N2X6 119 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 NARS2Q96I59 477 aaKnown RBP4.72□□□□□ -1.65
LINC00643-203ENST00000555518 GPR82Q96P67 336 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 CITED1Q99966 193 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 RHPN1-AS1Q9BWJ2 59 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 SEC11CQ9BY50 192 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 PARLQ9H300 379 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF331Q9NQX6 463 aaPredicted RBP4.72□□□□□ -1.65
LINC00643-203ENST00000555518 OTORQ9NRC9 128 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 MLXQ9UH92 298 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 UFC1Q9Y3C8 167 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 PGPA6NDG6 321 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 F8W036 122 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 CCL24O00175 119 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 PEX7O00628 323 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 IGLV2-11P01706 119 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 TCRAP04437 139 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 FOLR2P14207 255 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 CBLN1P23435 193 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 HLA-DMBP28068 263 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 S100A7P31151 101 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 GALR1P47211 349 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 RANP62826 216 aaKnown RBP4.71□□□□□ -1.66
LINC00643-203ENST00000555518 SOHLH1Q5JUK2 328 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 NDUFA11Q86Y39 141 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 LYPD1Q8N2G4 141 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 RPUSD4Q96CM3 377 aaKnown RBP4.71□□□□□ -1.66
LINC00643-203ENST00000555518 IGF2BP2-AS1Q96M15 143 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 TCEAL7Q9BRU2 100 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 NKX6-2Q9C056 277 aaPredicted RBP4.71□□□□□ -1.66
LINC00643-203ENST00000555518 EPDR1Q9UM22 224 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 RNF24Q9Y225 148 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 SELENOKQ9Y6D0 94 aa4.71□□□□□ -1.66
LINC00643-203ENST00000555518 SORL1Q92673 2214 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 STAB1Q9NY15 2570 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 FBN1P35555 2871 aaKnown RBP4.7□□□□□ -1.66
LINC00643-203ENST00000555518 A0A1W2PS18 150 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 M0R3E3 92 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 APOC3P02656 99 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 SLC25A5P05141 298 aaKnown RBP4.7□□□□□ -1.66
LINC00643-203ENST00000555518 PRB4P10163 310 aaPredicted RBP4.7□□□□□ -1.66
LINC00643-203ENST00000555518 RPL35P42766 123 aaKnown RBP4.7□□□□□ -1.66
LINC00643-203ENST00000555518 MEOX2P50222 304 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 OR9G4Q8NGQ1 327 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 MPLKIPQ8TAP9 179 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 DCANP1Q8TF63 244 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 HIST1H2BAQ96A08 127 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 LINC00479Q96M42 142 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 SDF2L1Q9HCN8 221 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 KLF12Q9Y4X4 402 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 NOTCH3Q9UM47 2321 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 VWFP04275 2813 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
LINC00643-203ENST00000555518 TRAV34A0A0B4J273 112 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 TRBV6-1A0A0K0K1D8 114 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 HELTA6NFD8 242 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 PGPEP1LA6NFU8 196 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 ZNF705FA8MVS1 300 aaPredicted RBP4.69□□□□□ -1.66
LINC00643-203ENST00000555518 C9JCJ5 164 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 K7EN84 100 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 ISLRO14498 428 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 CEBPGP53567 150 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 RPL23P62829 140 aaKnown RBP4.69□□□□□ -1.66
LINC00643-203ENST00000555518 PSG9Q00887 426 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 TMEM183BQ1AE95 376 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 ZNF674Q2M3X9 581 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 NSUN5P1Q3KNT7 163 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 FAM74A3Q4VXF1 159 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 Q6ZTC4 211 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 TCF24Q7RTU0 167 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 FAM24BQ8N5W8 94 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 RNF182Q8N6D2 247 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 ARL6IP6Q8N6S5 226 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 MRPL53Q96EL3 112 aaKnown RBP4.69□□□□□ -1.66
LINC00643-203ENST00000555518 GRAMD2BQ96HH9 432 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 SMIM7Q9BQ49 75 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 SLC50A1Q9BRV3 221 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 ATG101Q9BSB4 218 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 TM2D2Q9BX73 214 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 CTDSP1Q9GZU7 261 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 NRN1Q9NPD7 142 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 SIGLEC8Q9NYZ4 499 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
LINC00643-203ENST00000555518 IGKV2-40A0A087WW87 121 aaPredicted RBP4.68□□□□□ -1.66
LINC00643-203ENST00000555518 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 ZNF727A8MUV8 499 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 K7EQG2 157 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 OVOL1O14753 267 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 SCO1O75880 301 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms