RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SOCS3O14543 225 aa13.25□□□□□ -0.29
PSEN1-212ENST00000555254 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-212ENST00000555254 ATRAIDQ6UW56 229 aa13.25□□□□□ -0.29
PSEN1-212ENST00000555254 SGK494Q96LW2 274 aa13.25□□□□□ -0.29
PSEN1-212ENST00000555254 IGF2BP2-AS1Q96M15 143 aa13.25□□□□□ -0.29
PSEN1-212ENST00000555254 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
PSEN1-212ENST00000555254 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 K7EQG2 157 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 TSPAN4O14817 238 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 SAP30O75446 220 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 Q86TA4 180 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
PSEN1-212ENST00000555254 AURKAIP1Q9NWT8 199 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-212ENST00000555254 A0A087WWC5 75 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 PGPEP1LA6NFU8 196 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 OR4C46A6NHA9 309 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 LTAP01374 205 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 C15orf54Q8N8G6 183 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 ANAPC16Q96DE5 110 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 C20orf173Q96LM9 149 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
PSEN1-212ENST00000555254 TRAV8-1A0A0A6YYK1 113 aa13.22□□□□□ -0.29
PSEN1-212ENST00000555254 PRAC2D3DTV9 90 aa13.22□□□□□ -0.29
PSEN1-212ENST00000555254 CD300EQ496F6 205 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-212ENST00000555254 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
PSEN1-212ENST00000555254 ISOC2Q96AB3 205 aa13.22□□□□□ -0.29
PSEN1-212ENST00000555254 H7BYZ3 331 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 SCO1O75880 301 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 GCGP01275 180 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 PRB2P02812 416 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-212ENST00000555254 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 RNF212Q495C1 297 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 TMEM183AQ8IXX5 376 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 TMEM61Q8N0U2 210 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
PSEN1-212ENST00000555254 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-212ENST00000555254 VGLL1Q99990 258 aa13.21□□□□□ -0.29
PSEN1-212ENST00000555254 KMT2CQ8NEZ4 4911 aaKnown RBP13.21□□□□□ -0.3
PSEN1-212ENST00000555254 CT45A10P0DMU9 189 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 ZNF138P52744 262 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-212ENST00000555254 ERVFC1-1P60608 527 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 ERCC8Q13216 396 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 BTN1A1Q13410 526 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 EBLN2Q6P2I7 272 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 NHLRC2Q8NBF2 726 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
PSEN1-212ENST00000555254 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
PSEN1-212ENST00000555254 K7EN84 100 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 IGLV2-8P01709 118 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 PRB4P10163 310 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-212ENST00000555254 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-212ENST00000555254 OR5I1Q13606 314 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 OR8A1Q8NGG7 326 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 OSTCQ9NRP0 149 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
PSEN1-212ENST00000555254 DUSP14O95147 198 aaKnown RBP13.18□□□□□ -0.3
PSEN1-212ENST00000555254 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
PSEN1-212ENST00000555254 MLST8Q9BVC4 326 aa13.18□□□□□ -0.3
PSEN1-212ENST00000555254 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 GATCO43716 136 aaKnown RBP13.17□□□□□ -0.3
PSEN1-212ENST00000555254 S100PP25815 95 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 INSL3P51460 131 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 SMUG1Q53HV7 270 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 PRR25Q96S07 402 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 GPR61Q9BZJ8 451 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 ZNF492Q9P255 531 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
PSEN1-212ENST00000555254 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
PSEN1-212ENST00000555254 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-212ENST00000555254 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
PSEN1-212ENST00000555254 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
PSEN1-212ENST00000555254 FAM231DQ6ZW35 169 aa13.16□□□□□ -0.3
PSEN1-212ENST00000555254 Q8TAT8 98 aa13.16□□□□□ -0.3
PSEN1-212ENST00000555254 TUBA4BQ9H853 241 aa13.16□□□□□ -0.3
PSEN1-212ENST00000555254 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-212ENST00000555254 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 DEFB131AP59861 70 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 RYR3Q15413 4870 aa13.15□□□□□ -0.3
PSEN1-212ENST00000555254 P01737 135 aa13.14□□□□□ -0.31
PSEN1-212ENST00000555254 ZNF705DP0CH99 300 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-212ENST00000555254 ZNF705BP0CI00 300 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-212ENST00000555254 KRTAP10-11P60412 298 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms