RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 KIR2DL5BQ8NHK3 375 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 FAM210AQ96ND0 272 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 RARRES2Q99969 163 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 VGLL1Q99990 258 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 ATG101Q9BSB4 218 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 KLF12Q9Y4X4 402 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 IGKV2-40A0A087WW87 121 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 TRBV7-9A0A0J9YWB2 115 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 PEX7O00628 323 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 PDE6DO43924 150 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 IGKV2D-40P01614 121 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 IGKV3-20P01619 116 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 RPL35AP18077 110 aaKnown RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 ZNF138P52744 262 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 ZNF506Q5JVG8 444 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 MRAPQ8TCY5 172 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 FAM19A4Q96LR4 140 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
SYNE2-215ENST00000554997 ZNF492Q9P255 531 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 RPH3ALQ9UNE2 315 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
SYNE2-215ENST00000554997 UBE2CO00762 179 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 IGLV2-11P01706 119 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 TSPOP30536 169 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 APOC4P55056 127 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 TMEM75Q8N9X5 138 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 LINC00479Q96M42 142 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 ODF3Q96PU9 254 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 SMDT1Q9H4I9 107 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 PSG8Q9UQ74 426 aa7.48□□□□□ -1.21
SYNE2-215ENST00000554997 TRBV6-1A0A0K0K1D8 114 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 AMBPP02760 352 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 GIG44P09565 113 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-215ENST00000554997 PEA15Q15121 130 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 TMEM183BQ1AE95 376 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 C2CD4CQ8TF44 421 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 C11orf52Q96A22 123 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 FMC1Q96HJ9 113 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 C1QTNF4Q9BXJ3 329 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
SYNE2-215ENST00000554997 TRAV8-1A0A0A6YYK1 113 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 TMEM250H0YL14 139 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 CRISP2P16562 243 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 LEPP41159 167 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 CDKN1BP46527 198 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 TAS2R60P59551 318 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 FLI1Q01543 452 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-215ENST00000554997 TOR2AQ5JU69 321 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 Q6ZWC4 215 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 MED9Q9NWA0 146 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
SYNE2-215ENST00000554997 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
SYNE2-215ENST00000554997 RAB19A4D1S5 217 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 CRXO43186 299 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-215ENST00000554997 CA1P00915 261 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-215ENST00000554997 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
SYNE2-215ENST00000554997 AKR1C3P42330 323 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 UBE2G1P62253 170 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
SYNE2-215ENST00000554997 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 TVP23CQ96ET8 276 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 B9D2Q9BPU9 175 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 TREM1Q9NP99 234 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
SYNE2-215ENST00000554997 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 KLLNB2CW77 178 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 M0R2Z0 102 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 LTAP01374 205 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 GPX1P07203 203 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
SYNE2-215ENST00000554997 FXYD7P58549 80 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 Q8TAT8 98 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 IGF2BP2-AS1Q96M15 143 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
SYNE2-215ENST00000554997 TRAV12-2A0A075B6T6 113 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 C9JQL5 133 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 ZNF324O75467 553 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-215ENST00000554997 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
SYNE2-215ENST00000554997 KIR3DS1Q14943 382 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 TMEM183AQ8IXX5 376 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 RNF183Q96D59 192 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 ASCL2Q99929 193 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms