RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 LYSTQ99698 3801 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 ARPC5LQ9BPX5 153 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 AAMDCQ9H7C9 122 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 PRELID1Q9Y255 219 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 LOC102723971A0A1B0GUV8 181 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 TAAR5O14804 337 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 JTBO76095 146 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 AMBPP02760 352 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 GCHFRP30047 84 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 CDKN1BP46527 198 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 GNG5P63218 68 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 Q6ZTC4 211 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 PHLDA1Q8WV24 401 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-214ENST00000554928 HYLS1Q96M11 299 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
SYNE2-214ENST00000554928 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 PGPA6NDG6 321 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 BCL2L11O43521 198 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 HBE1P02100 147 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 FHITP49789 147 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 BTN1A1Q13410 526 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 RRN3P1Q2M238 152 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
SYNE2-214ENST00000554928 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 TMUB2Q71RG4 321 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 TCTE3Q8IZS6 198 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 SUN5Q8TC36 379 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 LINC01587Q99440 93 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
SYNE2-214ENST00000554928 TMPRSS5Q9H3S3 457 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 OTORQ9NRC9 128 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 RPH3ALQ9UNE2 315 aa8.83□□□□□ -1
SYNE2-214ENST00000554928 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 LOC100996750A0A140TA64 210 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 DIRC3C9JPN6 131 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 MBP02144 154 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 HTN1P15515 57 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 LEPP41159 167 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 FGF8P55075 233 aaPredicted RBP8.82□□□□□ -1
SYNE2-214ENST00000554928 LGALSLQ3ZCW2 172 aaPredicted RBP8.82□□□□□ -1
SYNE2-214ENST00000554928 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 LYPD1Q8N2G4 141 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 ODF3Q96PU9 254 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 ZNF471Q9BX82 626 aaPredicted RBP8.82□□□□□ -1
SYNE2-214ENST00000554928 KRTAP4-6Q9BYQ5 205 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 ZNF492Q9P255 531 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 DKK2Q9UBU2 259 aa8.82□□□□□ -1
SYNE2-214ENST00000554928 YTHDF2Q9Y5A9 579 aaKnown RBP8.82□□□□□ -1
SYNE2-214ENST00000554928 A0A0D9SG52 128 aa8.81□□□□□ -1
SYNE2-214ENST00000554928 CTXND1A0A1B0GTU2 59 aa8.81□□□□□ -1
SYNE2-214ENST00000554928 KLLNB2CW77 178 aa8.81□□□□□ -1
SYNE2-214ENST00000554928 AKR1C8PQ5T2L2 129 aa8.81□□□□□ -1
SYNE2-214ENST00000554928 LINC00477Q96M19 166 aa8.81□□□□□ -1
SYNE2-214ENST00000554928 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 LCE6AA0A183 80 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 KANTRA0A1W2PQU2 76 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 C7orf71A4D174 169 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 GGTLC3B5MD39 225 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 CRISP2P16562 243 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 TSPOP30536 169 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 RNASE4P34096 147 aaKnown RBP8.8□□□□□ -1
SYNE2-214ENST00000554928 TAS2R60P59551 318 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 TMEM78Q5T7P6 136 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 GOLT1AQ6ZVE7 132 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 IQCF2Q8IXL9 164 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 TVP23CQ96ET8 276 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 SGK494Q96LW2 274 aa8.8□□□□□ -1
SYNE2-214ENST00000554928 NUPR2A6NF83 97 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 ZNF324O75467 553 aaPredicted RBP8.79□□□□□ -1
SYNE2-214ENST00000554928 CXorf1O96002 111 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 C1QBP02746 253 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 SLC25A5P05141 298 aaKnown RBP8.79□□□□□ -1
SYNE2-214ENST00000554928 CSN1S1P47710 185 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 ZNF138P52744 262 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 UBE2G2P60604 165 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 AKAP14Q86UN6 197 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
SYNE2-214ENST00000554928 TMED6Q8WW62 240 aa8.79□□□□□ -1
SYNE2-214ENST00000554928 TMEM189A5PLL7 270 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 RBAKDNA6NC62 111 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 MAP1LC3B2A6NCE7 125 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 H7BYZ3 331 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 PFDN1O60925 122 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 SEC11BP0C7V7 166 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 SUMO1P63165 101 aaKnown RBP8.78□□□□□ -1
SYNE2-214ENST00000554928 TMEM256Q8N2U0 113 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 MAP1LC3BQ9GZQ8 125 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 TMEM167BQ9NRX6 74 aa8.78□□□□□ -1
SYNE2-214ENST00000554928 A0A1B0GV50 99 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 GPX1P07203 203 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms