RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TRAV34A0A0B4J273 112 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 IGHV1-3A0A0C4DH29 117 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 OOSP1A8MZH6 123 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 E7EUB6 86 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 ENSAO43768 121 aaKnown RBP8.68□□□□□ -1.02
SRP54-205ENST00000554803 NDUFA7O95182 113 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 CA1P00915 261 aaPredicted RBP8.68□□□□□ -1.02
SRP54-205ENST00000554803 CAMPP49913 170 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
SRP54-205ENST00000554803 SAPCD1Q5SSQ6 148 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 GDF5OSQ5U4N7 250 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 EBLN2Q6P2I7 272 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 SLC25A39Q9BZJ4 359 aaPredicted RBP8.68□□□□□ -1.02
SRP54-205ENST00000554803 RNF114Q9Y508 228 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 COX11Q9Y6N1 276 aa8.68□□□□□ -1.02
SRP54-205ENST00000554803 SACSQ9NZJ4 4579 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 TRBV19A0A075B6N1 114 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 H3BRN7 92 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 I3L2K1 104 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 CT45A10P0DMU9 189 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 RAB9AP51151 201 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 GNG5P63218 68 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
SRP54-205ENST00000554803 PSG9Q00887 426 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 PAX8Q06710 450 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 BATFQ16520 125 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 Q56UQ5 140 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 C10orf55Q5SWW7 151 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 C9orf139Q6ZV77 190 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 BLNKQ8WV28 456 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 SRSF12Q8WXF0 261 aaKnown RBP8.67□□□□□ -1.02
SRP54-205ENST00000554803 RPEQ96AT9 228 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 ONECUT1Q9UBC0 465 aa8.67□□□□□ -1.02
SRP54-205ENST00000554803 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 IGHV2-70DA0A0C4DH43 119 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 K7EP13 123 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 M0R1W7 72 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 APOHP02749 345 aaPredicted RBP8.66□□□□□ -1.02
SRP54-205ENST00000554803 PSG1P11464 419 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 IGLL1P15814 213 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 HTR1DP28221 377 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 ARF6P62330 175 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 PSG3Q16557 428 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 RUSC1-AS1Q66K80 236 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 STPG4Q8N801 248 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 NPBQ8NG41 125 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 AAMDCQ9H7C9 122 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 THYN1Q9P016 225 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 ZNRD1Q9P1U0 126 aa8.66□□□□□ -1.02
SRP54-205ENST00000554803 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 NPIPB5A8MRT5 1133 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 LY6LH3BQJ8 138 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.02
SRP54-205ENST00000554803 TOX4O94842 621 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 NPSP0C0P6 89 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
SRP54-205ENST00000554803 LYZP61626 148 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 HIST1H1AQ02539 215 aaPredicted RBP8.65□□□□□ -1.02
SRP54-205ENST00000554803 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 LEMD1Q68G75 181 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 HCP5Q6MZN7 132 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 CCDC144NLQ6NUI1 221 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
SRP54-205ENST00000554803 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
SRP54-205ENST00000554803 TNCP24821 2201 aa8.65□□□□□ -1.03
SRP54-205ENST00000554803 WI2-2373I1.2A0A1W2PRP0 233 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 SH2D7A6NKC9 451 aaPredicted RBP8.64□□□□□ -1.03
SRP54-205ENST00000554803 NDUFA3O95167 84 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 IGLV2-11P01706 119 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 PTTG1IPP53801 180 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 PROK1P58294 105 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 KLRD1Q13241 179 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 RNF125Q96EQ8 232 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 SIRPDQ9H106 197 aa8.64□□□□□ -1.03
SRP54-205ENST00000554803 NBR2O15453 112 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 PPBPP02775 128 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 RPL7P18124 248 aaKnown RBP8.63□□□□□ -1.03
SRP54-205ENST00000554803 BMI1P35226 326 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 MFAP4P55083 255 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 SEC11AP67812 179 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 GOLT1AQ6ZVE7 132 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 VMO1Q7Z5L0 202 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms