RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ZNF680Q8NEM1 530 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 BPIFCQ8NFQ6 507 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 DTD1Q8TEA8 209 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
ATXN3-229ENST00000554672 ST6GAL2Q96JF0 529 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 RTBDNQ9BSG5 229 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-229ENST00000554672 MRPL32Q9BYC8 188 aaKnown RBP3.19□□□□□ -1.9
ATXN3-229ENST00000554672 SLIRPQ9GZT3 109 aaKnown RBP3.19□□□□□ -1.9
ATXN3-229ENST00000554672 GSN-AS1Q9NRJ2 163 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 FUT9Q9Y231 359 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 A0A087X0K7 114 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 A0A1B0GUV1 79 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 ANKRD20A5PA0PJZ0 165 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 IBA57-AS1B1ANH7 110 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RS1O15537 224 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 SPINK4O60575 86 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 CD3DP04234 171 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 SRIP30626 198 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 LEPP41159 167 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 CCR6P51684 374 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 TAS2R19P59542 299 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RNASE10Q5GAN6 216 aaKnown RBP3.18□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM268Q5VZI3 342 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM182Q6ZP80 229 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-229ENST00000554672 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 SNX29P2Q8IUI4 249 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 OR4D10Q8NGI6 311 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 OR13C8Q8NGS7 320 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 OR1S1Q8NH92 325 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 LHFPL5Q8TAF8 219 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 ZNF431Q8TF32 576 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-229ENST00000554672 IL22RA2Q969J5 263 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 SHANK2-AS3Q9BTD1 123 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RBKSQ9H477 322 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 NAA60Q9H7X0 242 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 HSPB7Q9UBY9 170 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
ATXN3-229ENST00000554672 KCNIP3Q9Y2W7 256 aa3.18□□□□□ -1.9
ATXN3-229ENST00000554672 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 CRYM-AS1A6NIL9 109 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 H3BMQ9 156 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 H3BRN7 92 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 K7EQD1 137 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 HYPMO75409 117 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 RAB3DO95716 219 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 ORM1P02763 201 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 AKR1C4P17516 323 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 CXCL2P19875 107 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 ANXA7P20073 488 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 GATA2P23769 480 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 TNFSF8P32971 234 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 ASIPP42127 132 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 RPP30P78346 268 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 SMCO1Q147U7 214 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 SCGB2B2Q4G0G5 96 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 CCDC190Q86UF4 302 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 IQCF2Q8IXL9 164 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 EIF4E3Q8N5X7 224 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 MARCH1Q8TCQ1 289 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 PCNPQ8WW12 178 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 PRRT1Q99946 306 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 TXNDC17Q9BRA2 123 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 PARD6GQ9BYG4 376 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 DNAJC4Q9NNZ3 241 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 EXTL2Q9UBQ6 330 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 RSL24D1Q9UHA3 163 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 C14orf166Q9Y224 244 aaKnown RBP3.17□□□□□ -1.9
ATXN3-229ENST00000554672 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
ATXN3-229ENST00000554672 A0A0B4J2A0 478 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PIGBOS1A0A0B4J2F0 54 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PMS2P5A8MQ11 134 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 FAM25AB3EWG3 89 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 FAM25CB3EWG5 89 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 FAM25GB3EWG6 89 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PRAC2D3DTV9 90 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 E5RGE8 158 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PITX3O75364 302 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 IL5P05113 134 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
ATXN3-229ENST00000554672 AKAIN1P0CW23 69 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PRB4P10163 310 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms