RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 DNAH10Q8IVF4 4471 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 A0A087X0K7 114 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 A0A1W2PS18 150 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 GGTLC3B5MD39 225 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 C9JCJ5 164 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 H3BQ15 152 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 BUB3O43684 328 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 NPPCP23582 126 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 TCF24Q7RTU0 167 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 OR11H2Q8NH07 326 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 HIST1H2BAQ96A08 127 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 C11orf68Q9H3H3 251 aaKnown RBP7.71□□□□□ -1.18
SHMT2-215ENST00000554656 SDF2L1Q9HCN8 221 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 OTORQ9NRC9 128 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 VPS13DQ5THJ4 4388 aa7.71□□□□□ -1.18
SHMT2-215ENST00000554656 TRBV19A0A075B6N1 114 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 A0A087WWC5 75 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 DEFB4AO15263 64 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
SHMT2-215ENST00000554656 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-215ENST00000554656 GALR1P47211 349 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 CEBPGP53567 150 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 TAS2R60P59551 318 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
SHMT2-215ENST00000554656 PSG9Q00887 426 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 TMEM241Q24JQ0 296 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 LEMD1Q68G75 181 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 OR8I2Q8N0Y5 310 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 C2CD4CQ8TF44 421 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 GRAMD2BQ96HH9 432 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 MS4A6AQ9H2W1 248 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 ZNF586Q9NXT0 402 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 CLEC5AQ9NY25 188 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 PRELID1Q9Y255 219 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 DNAH6Q9C0G6 4158 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 HECTD4Q9Y4D8 3996 aa7.7□□□□□ -1.18
SHMT2-215ENST00000554656 SERTM2A0A1B0GWG4 89 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 NDUFB4O95168 129 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 CA1P00915 261 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-215ENST00000554656 DEFB131AP59861 70 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 C16orf54Q6UWD8 224 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 Q9H3A6 140 aa7.69□□□□□ -1.18
SHMT2-215ENST00000554656 PGPA6NDG6 321 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 HELTA6NFD8 242 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 FBLL1A6NHQ2 334 aaKnown RBP7.68□□□□□ -1.18
SHMT2-215ENST00000554656 M0R036 132 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 PEX7O00628 323 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 AKR1C3P42330 323 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 CNN1P51911 297 aaKnown RBP7.68□□□□□ -1.18
SHMT2-215ENST00000554656 CMC4P56277 68 aaPredicted RBP7.68□□□□□ -1.18
SHMT2-215ENST00000554656 RANP62826 216 aaKnown RBP7.68□□□□□ -1.18
SHMT2-215ENST00000554656 ATRAIDQ6UW56 229 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 SIGLEC15Q6ZMC9 328 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 Q8NAQ8 132 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 C11orf45Q8TAV5 145 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 BLNKQ8WV28 456 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 SLC50A1Q9BRV3 221 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 ATG101Q9BSB4 218 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 CTDSP1Q9GZU7 261 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
SHMT2-215ENST00000554656 TRAV2A0A0B4J234 112 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 TRBV6-1A0A0K0K1D8 114 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 C7orf77A4D0Y5 90 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 K7EQG2 157 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
SHMT2-215ENST00000554656 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
SHMT2-215ENST00000554656 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 RPL23P62829 140 aaKnown RBP7.67□□□□□ -1.18
SHMT2-215ENST00000554656 RBMY1FQ15415 496 aaKnown RBP7.67□□□□□ -1.18
SHMT2-215ENST00000554656 ZNF674Q2M3X9 581 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 TMEM242Q9NWH2 141 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 KLF12Q9Y4X4 402 aa7.67□□□□□ -1.18
SHMT2-215ENST00000554656 HERC2O95714 4834 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 K7EQM0 130 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 DNASE2O00115 360 aaPredicted RBP7.66□□□□□ -1.18
SHMT2-215ENST00000554656 RPL35P42766 123 aaKnown RBP7.66□□□□□ -1.18
SHMT2-215ENST00000554656 PAFAH1B2P68402 229 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 TMEM183BQ1AE95 376 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 TRPT1Q86TN4 253 aaKnown RBP7.66□□□□□ -1.18
SHMT2-215ENST00000554656 LINC01551Q86U37 167 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 CMTM2Q8TAZ6 248 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 MRPL53Q96EL3 112 aaKnown RBP7.66□□□□□ -1.18
SHMT2-215ENST00000554656 FMC1Q96HJ9 113 aa7.66□□□□□ -1.18
SHMT2-215ENST00000554656 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
SHMT2-215ENST00000554656 TRBV20OR9-2A0A075B6H5 130 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 IGHV4-28A0A0C4DH34 117 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 KNCNA6PVL3 124 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 MT-ND4LP03901 98 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms