RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 SRSF1Q07955 248 aaKnown RBP eCLIP13.81□□□□□ -0.2
MEG3-224ENST00000554639 PMCHL1Q16048 86 aa13.81□□□□□ -0.2
MEG3-224ENST00000554639 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
MEG3-224ENST00000554639 IGHV3-35A0A0C4DH35 117 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 F2Z2F3 143 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 AVPP01185 164 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
MEG3-224ENST00000554639 TFPI2P48307 235 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 SMIM15Q7Z3B0 74 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 C8orf49Q96NF6 230 aa13.8□□□□□ -0.2
MEG3-224ENST00000554639 SH2D1AO60880 128 aa13.79□□□□□ -0.2
MEG3-224ENST00000554639 AMTP48728 403 aa13.79□□□□□ -0.2
MEG3-224ENST00000554639 C9orf139Q6ZV77 190 aa13.79□□□□□ -0.2
MEG3-224ENST00000554639 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
MEG3-224ENST00000554639 CFHR3Q02985 330 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 Q6ZN92 141 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 RCHY1Q96PM5 261 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 AKAP6Q13023 2319 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 ZNF493Q6ZR52 646 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 NRGNQ92686 78 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 CHCHD1Q96BP2 118 aaKnown RBP13.78□□□□□ -0.2
MEG3-224ENST00000554639 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
MEG3-224ENST00000554639 NRN1Q9NPD7 142 aa13.78□□□□□ -0.2
MEG3-224ENST00000554639 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
MEG3-224ENST00000554639 IGHV3OR16-8A0A075B7F1 116 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 FABP5P3A8MUU1 101 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 HSBP1O75506 76 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 C8orf86Q6ZUL3 223 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 ASCL2Q99929 193 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 VGLL1Q99990 258 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 LENEPQ9Y5L5 61 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 FSHBP01225 129 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 PF4V1P10720 104 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 PMCHP20382 165 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 TSPOP30536 169 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 KRTDAPP60985 99 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 BLCAPP62952 87 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 DEFB113Q30KQ7 82 aa13.76□□□□□ -0.21
MEG3-224ENST00000554639 TGFAP01135 160 aa13.75□□□□□ -0.21
MEG3-224ENST00000554639 CD33P20138 364 aa13.75□□□□□ -0.21
MEG3-224ENST00000554639 DEFB112Q30KQ8 113 aa13.75□□□□□ -0.21
MEG3-224ENST00000554639 C9orf47Q6ZRZ4 202 aa13.75□□□□□ -0.21
MEG3-224ENST00000554639 Q71RC1 249 aaPredicted RBP13.75□□□□□ -0.21
MEG3-224ENST00000554639 TRAV8-2A0A0B4J237 113 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 ARMS2P0C7Q2 107 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 HLA-DMBP28068 263 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 HIST1H1AQ02539 215 aaPredicted RBP13.74□□□□□ -0.21
MEG3-224ENST00000554639 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 OR4X2Q8NGF9 303 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 NPFFR1Q9GZQ6 430 aa13.74□□□□□ -0.21
MEG3-224ENST00000554639 K7EMT4 169 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 ZNF138P52744 262 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 TMEM78Q5T7P6 136 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 SAMD13Q5VXD3 122 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 USP24Q9UPU5 2620 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 LINC01559Q495D7 138 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 NIT1Q86X76 327 aa13.73□□□□□ -0.21
MEG3-224ENST00000554639 USP9XQ93008 2570 aaPredicted RBP13.72□□□□□ -0.21
MEG3-224ENST00000554639 IGHV3-66A0A0C4DH42 116 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 A1L4Q6 167 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 IGLC6P0CF74 106 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 IGHV4-31P0DP07 118 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 LYZL1Q6UWQ5 148 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 PET117Q6UWS5 81 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 FER1L6-AS1Q8NA97 138 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 Q8TAT8 98 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 C16orf92Q96LL3 132 aa13.72□□□□□ -0.21
MEG3-224ENST00000554639 OR5AL1P0C617 328 aa13.71□□□□□ -0.21
MEG3-224ENST00000554639 IGFL4Q6B9Z1 124 aa13.71□□□□□ -0.21
MEG3-224ENST00000554639 CNFNQ9BYD5 112 aa13.71□□□□□ -0.21
MEG3-224ENST00000554639 KLK15Q9H2R5 256 aa13.71□□□□□ -0.21
MEG3-224ENST00000554639 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.71□□□□□ -0.21
MEG3-224ENST00000554639 TRAV9-2A0A087WT02 112 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 PRAC2D3DTV9 90 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 OVOL1O14753 267 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 C3orf79P0CE67 100 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 PSMB8P28062 276 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 RNASEKQ6P5S7 137 aaKnown RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 RNF182Q8N6D2 247 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 PEF1Q9UBV8 284 aaKnown RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 VPREB3Q9UKI3 123 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 RNF223E7ERA6 249 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 M0R2Z0 102 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 ZNF80P51504 273 aaPredicted RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 FAM106AQ4KMX7 169 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 Q6YL49 198 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 LINC00477Q96M19 166 aa13.7□□□□□ -0.22
MEG3-224ENST00000554639 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 CHTOPQ9Y3Y2 248 aaKnown RBP13.7□□□□□ -0.22
MEG3-224ENST00000554639 IGHV7-4-1A0A0J9YVY3 117 aa13.69□□□□□ -0.22
MEG3-224ENST00000554639 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
MEG3-224ENST00000554639 NTF3P20783 257 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms