RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 IBA57Q5T440 356 aaKnown RBP16.5■□□□□ 0.23
FOXA1-204ENST00000554607 LYPD5Q6UWN5 251 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 TNFRSF18Q9Y5U5 241 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 TRBV19A0A075B6N1 114 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 K7EP13 123 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 RNASE4P34096 147 aaKnown RBP16.49■□□□□ 0.23
FOXA1-204ENST00000554607 CD300CQ08708 224 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 BTN1A1Q13410 526 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 MIC13Q5XKP0 118 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 FAM19A4Q96LR4 140 aa16.49■□□□□ 0.23
FOXA1-204ENST00000554607 M0R3E3 92 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 GPX1P07203 203 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 NMBP08949 121 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 SPANXN2Q5MJ10 180 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 MITD1Q8WV92 249 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 AGPAT4-IT1Q9H0P7 198 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 HHLA3Q9XRX5 114 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 LY96Q9Y6Y9 160 aa16.48■□□□□ 0.23
FOXA1-204ENST00000554607 RGS13O14921 159 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 IGHV3-53P01767 116 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 CRISP2P16562 243 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 BCAP31P51572 246 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 CRYBA4P53673 196 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 KRTAP10-1P60331 282 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 TRIQKQ629K1 86 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 NEGR1Q7Z3B1 354 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 SRRQ9GZT4 340 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 C20orf85Q9H1P6 137 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 TMEM14CQ9P0S9 112 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 WDR83OSQ9Y284 106 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 TIMM9Q9Y5J7 89 aa16.47■□□□□ 0.23
FOXA1-204ENST00000554607 HIST1H1EP10412 219 aaKnown RBP16.46■□□□□ 0.23
FOXA1-204ENST00000554607 RPL29P47914 159 aaKnown RBP16.46■□□□□ 0.23
FOXA1-204ENST00000554607 PDE6HQ13956 83 aa16.46■□□□□ 0.23
FOXA1-204ENST00000554607 ICAM4Q14773 271 aa16.46■□□□□ 0.23
FOXA1-204ENST00000554607 VGLL1Q99990 258 aa16.46■□□□□ 0.23
FOXA1-204ENST00000554607 SLC39A9Q9NUM3 307 aa16.46■□□□□ 0.23
FOXA1-204ENST00000554607 UQCC1Q9NVA1 299 aa16.46■□□□□ 0.23
FOXA1-204ENST00000554607 CENPXA8MT69 81 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 DNAH10OSP0CZ25 163 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 ZNF846Q147U1 533 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 C9orf47Q6ZRZ4 202 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 ARPC5LQ9BPX5 153 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 MSRB1Q9NZV6 116 aa16.45■□□□□ 0.22
FOXA1-204ENST00000554607 PRAF2O60831 178 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 CAV2P51636 162 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 FHL2Q14192 279 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 C8orf49Q96NF6 230 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 AAMDCQ9H7C9 122 aa16.44■□□□□ 0.22
FOXA1-204ENST00000554607 MRPL16Q9NX20 251 aaKnown RBP16.44■□□□□ 0.22
FOXA1-204ENST00000554607 IGHV1OR15-1A0A075B7D0 117 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 CST7O76096 145 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 NDUFB4O95168 129 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 EVI2AP22794 236 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 GCSHP23434 173 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 BAK1Q16611 211 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 TMEM78Q5T7P6 136 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 MRPL32Q9BYC8 188 aaKnown RBP16.43■□□□□ 0.22
FOXA1-204ENST00000554607 TP53TG3Q9ULZ0 132 aa16.43■□□□□ 0.22
FOXA1-204ENST00000554607 LSM5Q9Y4Y9 91 aaKnown RBP16.43■□□□□ 0.22
FOXA1-204ENST00000554607 FAM229AH3BQW9 127 aa16.42■□□□□ 0.22
FOXA1-204ENST00000554607 VWC2Q2TAL6 325 aa16.42■□□□□ 0.22
FOXA1-204ENST00000554607 CHAC2Q8WUX2 184 aa16.42■□□□□ 0.22
FOXA1-204ENST00000554607 MYCBP2O75592 4640 aa16.41■□□□□ 0.22
FOXA1-204ENST00000554607 TRGV4A0A0C4DH28 118 aa16.41■□□□□ 0.22
FOXA1-204ENST00000554607 BAXQ07812 192 aa16.41■□□□□ 0.22
FOXA1-204ENST00000554607 EXOC3-AS1Q8N2X6 119 aa16.41■□□□□ 0.22
FOXA1-204ENST00000554607 FAM24AA6NFZ4 105 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 CCDC160A6NGH7 325 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 PVALBP20472 110 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-204ENST00000554607 SRIP30626 198 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 S100A11P31949 105 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 ZNF415Q09FC8 603 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 ZFAND2AQ8N6M9 145 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 BLNKQ8WV28 456 aa16.4■□□□□ 0.22
FOXA1-204ENST00000554607 UBE2L5PA0A1B0GUS4 154 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 E5RGE8 158 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 SMR3BP02814 79 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-204ENST00000554607 PYYP10082 97 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 BTCP35070 178 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 IQCF2Q8IXL9 164 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 PCNPQ8WW12 178 aaKnown RBP16.39■□□□□ 0.21
FOXA1-204ENST00000554607 ZNF492Q9P255 531 aa16.39■□□□□ 0.21
FOXA1-204ENST00000554607 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
FOXA1-204ENST00000554607 K7EQD1 137 aa16.38■□□□□ 0.21
FOXA1-204ENST00000554607 CCSO14618 274 aa16.38■□□□□ 0.21
FOXA1-204ENST00000554607 SULT1A1P50225 295 aa16.38■□□□□ 0.21
FOXA1-204ENST00000554607 SRRM2Q9UQ35 2752 aaKnown RBP16.38■□□□□ 0.21
FOXA1-204ENST00000554607 FLG2Q5D862 2391 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-204ENST00000554607 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-204ENST00000554607 TRBV7-9A0A0J9YWB2 115 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
FOXA1-204ENST00000554607 ORM1P02763 201 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 HBG1P69891 147 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 HBG2P69892 147 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 PRR9Q5T870 116 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 WFDC10BQ8IUB3 73 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 C10orf126Q8N4M7 172 aa16.37■□□□□ 0.21
FOXA1-204ENST00000554607 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms