RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 UFC1Q9Y3C8 167 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
SHMT2-214ENST00000554604 CD7P09564 240 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 V9GYV3 84 aa9.32□□□□□ -0.92
SHMT2-214ENST00000554604 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 TRBV6-1A0A0K0K1D8 114 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 ADMP35318 185 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 UBE2G1P62253 170 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-214ENST00000554604 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
SHMT2-214ENST00000554604 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 FRZBQ92765 325 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 SPATA25Q9BR10 227 aa9.31□□□□□ -0.92
SHMT2-214ENST00000554604 NDUFA4O00483 81 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 TCRAP04437 139 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 TRGC1P0CF51 173 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 GNG5P63218 68 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 OR5I1Q13606 314 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 PDE6HQ13956 83 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 DEFB125Q8N687 156 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 MUC7Q8TAX7 377 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 ZNF414Q96IQ9 312 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
SHMT2-214ENST00000554604 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
SHMT2-214ENST00000554604 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
SHMT2-214ENST00000554604 IGHV3OR16-8A0A075B7F1 116 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 TRAV25A0A0B4J276 109 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
SHMT2-214ENST00000554604 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
SHMT2-214ENST00000554604 HOXA5P20719 270 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
SHMT2-214ENST00000554604 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-214ENST00000554604 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 IBA57Q5T440 356 aaKnown RBP9.29□□□□□ -0.92
SHMT2-214ENST00000554604 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 GPR82Q96P67 336 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
SHMT2-214ENST00000554604 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 H3BTX0 84 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 SLC17A3O00476 420 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 ZNF207O43670 478 aaKnown RBP9.28□□□□□ -0.92
SHMT2-214ENST00000554604 ZNF253O75346 499 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 LTAP01374 205 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 S100A8P05109 93 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
SHMT2-214ENST00000554604 AKR1D1P51857 326 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 NDUFA6P56556 154 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 SIGLEC15Q6ZMC9 328 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SHMT2-214ENST00000554604 ZFAND3Q9H8U3 227 aa9.28□□□□□ -0.92
SHMT2-214ENST00000554604 K7EMT4 169 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.93
SHMT2-214ENST00000554604 PSG9Q00887 426 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 COX19Q49B96 90 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 TOMM20LQ6UXN7 152 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 LINC00518Q8N0U6 118 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
SHMT2-214ENST00000554604 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 RBMY1BA6NDE4 496 aaKnown RBP9.26□□□□□ -0.93
SHMT2-214ENST00000554604 RBMY1EA6NEQ0 496 aaKnown RBP9.26□□□□□ -0.93
SHMT2-214ENST00000554604 K7EQM0 130 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 RBMY1DP0C7P1 496 aaKnown RBP9.26□□□□□ -0.93
SHMT2-214ENST00000554604 Q86TA4 180 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 EXOC3-AS1Q8N2X6 119 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 GRAMD2BQ96HH9 432 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-214ENST00000554604 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
SHMT2-214ENST00000554604 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 A0A087X0K7 114 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms