RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 LINC00477Q96M19 166 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 AQP10Q96PS8 301 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 ODF3Q96PU9 254 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 C20orf144Q9BQM9 153 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 AGPAT4-IT1Q9H0P7 198 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 C7orf71A4D174 169 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 HMGB3O15347 200 aaKnown RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 SLC25A5P05141 298 aaKnown RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 GPX1P07203 203 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 M6PRP20645 277 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 RNASE4P34096 147 aaKnown RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 ZNF493Q6ZR52 646 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 OR10G4Q8NGN3 311 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 OR10G9Q8NGN4 311 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 OR10G7Q8NGN6 311 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 HYLS1Q96M11 299 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 VGLL1Q99990 258 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 Q9H3A6 140 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 NOP10Q9NPE3 64 aaKnown RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 TIMM8BQ9Y5J9 83 aaPredicted RBP7.58□□□□□ -1.2
SHMT2-213ENST00000554600 MUC4Q99102 2169 aa7.58□□□□□ -1.2
SHMT2-213ENST00000554600 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 BTN1A1Q13410 526 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 C9orf47Q6ZRZ4 202 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 UBE2DNLQ8IWF7 75 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 CMTM2Q8TAZ6 248 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 ZNF503Q96F45 646 aa7.57□□□□□ -1.2
SHMT2-213ENST00000554600 BORCS7-ASMTA0A0B4J1R7 106 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 PLAC8L1A1L4L8 177 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 F5H768 121 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 P0DMU3 169 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 FAM231AP0DMU4 169 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 FAM231CP0DMU5 169 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 CDC34P49427 236 aaPredicted RBP7.56□□□□□ -1.2
SHMT2-213ENST00000554600 ZNF138P52744 262 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 CD300CQ08708 224 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 FAM74A1Q5RGS3 127 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 PQLC2Q6ZP29 291 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 LYPD1Q8N2G4 141 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 Q8TAT8 98 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
SHMT2-213ENST00000554600 FAM210BQ96KR6 192 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 PYGO2Q9BRQ0 406 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 TNFSF18Q9UNG2 199 aa7.56□□□□□ -1.2
SHMT2-213ENST00000554600 PCLOQ9Y6V0 5065 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 PGPA6NDG6 321 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 CBY3A6NI87 242 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 RGS13O14921 159 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 ATP5G1P05496 136 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 ARL14EPLP0DKL9 152 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 ATP5G3P48201 142 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 RPL7L1Q6DKI1 246 aaKnown RBP7.55□□□□□ -1.2
SHMT2-213ENST00000554600 IQCF2Q8IXL9 164 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 RXFP4Q8TDU9 374 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 PSMG3Q9BT73 122 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-213ENST00000554600 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 ZNF492Q9P255 531 aa7.55□□□□□ -1.2
SHMT2-213ENST00000554600 GAGE12BA1L429 117 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 KLLNB2CW77 178 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 ARPC5O15511 151 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 GAGE7O76087 117 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 MBP02144 154 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 GAGE12FP0CL80 117 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 GAGE12GP0CL81 117 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 GAGE12IP0CL82 117 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 EIF4E3Q8N5X7 224 aaKnown RBP7.54□□□□□ -1.2
SHMT2-213ENST00000554600 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 GNPNAT1Q96EK6 184 aaPredicted RBP7.54□□□□□ -1.2
SHMT2-213ENST00000554600 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
SHMT2-213ENST00000554600 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 G3V3Q6 166 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 SMLR1H3BR10 107 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 TAAR5O14804 337 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 NMBP08949 121 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 CRISP2P16562 243 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 SERF2P84101 59 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 OR5I1Q13606 314 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 PRR9Q5T870 116 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 GOLT1AQ6ZVE7 132 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 ZFAND2AQ8N6M9 145 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 POM121L12Q8N7R1 296 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 RAB24Q969Q5 203 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 ARPC5LQ9BPX5 153 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 ACTR3CQ9C0K3 210 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-213ENST00000554600 GSN-AS1Q9NRJ2 163 aa7.53□□□□□ -1.2
SHMT2-213ENST00000554600 IGHV1OR15-1A0A075B7D0 117 aa7.52□□□□□ -1.21
SHMT2-213ENST00000554600 ZNF324O75467 553 aaPredicted RBP7.52□□□□□ -1.21
SHMT2-213ENST00000554600 NUDT3O95989 172 aa7.52□□□□□ -1.21
SHMT2-213ENST00000554600 STAG3L2P0CL84 134 aa7.52□□□□□ -1.21
SHMT2-213ENST00000554600 STAG3L3P0CL85 134 aa7.52□□□□□ -1.21
SHMT2-213ENST00000554600 GNG5P63218 68 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms