RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 DEFB113Q30KQ7 82 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 LYRM7Q5U5X0 104 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 C16orf47Q6ZP98 133 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 DNM1P46Q6ZS02 220 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 BAGE3Q86Y29 109 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 BAGE2Q86Y30 109 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 C10orf126Q8N4M7 172 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 OR10G2Q8NGC3 310 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 ADAT3Q96EY9 351 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 LINC00477Q96M19 166 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 RARRES2Q99969 163 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 FBXL15Q9H469 300 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 ZNF442Q9H7R0 627 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 NAA60Q9H7X0 242 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 PXMP4Q9Y6I8 212 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.88
ATXN3-225ENST00000554214 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
ATXN3-225ENST00000554214 GTF3C1Q12789 2109 aa3.34□□□□□ -1.88
ATXN3-225ENST00000554214 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SVEP1Q4LDE5 3571 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 TMED7-TICAM2A0A0A6YYA0 188 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF736B4DX44 427 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 H3BUT2 72 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SH2D1BO14796 132 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 RTL8CO15255 209 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 DEDDO75618 318 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 MT-ATP8P03928 68 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SLC25A5P05141 298 aaKnown RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 MRPL3P09001 348 aaKnown RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 LGALS1P09382 135 aaKnown RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 OPRK1P41145 380 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SSR4P51571 173 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SMIM11AP58511 58 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 RPS4XP62701 263 aaKnown RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 GNB2P62879 340 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF85Q03923 595 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF90Q03938 601 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 CEACAM16Q2WEN9 425 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 C9orf153Q5TBE3 101 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 BPIFA4PQ86YQ2 179 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 WDR31Q8NA23 367 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 GTSF1Q8WW33 167 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 PPDPFLQ8WWR9 84 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 C9orf85Q96MD7 179 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 LINC01587Q99440 93 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 NAA38Q9BRA0 125 aaKnown RBP3.33□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF670Q9BS34 389 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 VSIRQ9H7M9 311 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 EDA2RQ9HAV5 297 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 TVP23BQ9NYZ1 205 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 SEC16AO15027 2179 aa3.33□□□□□ -1.88
ATXN3-225ENST00000554214 IGHV1-45A0A0A0MS14 117 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 TRAV1-1A0A0B4J248 108 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 C3orf85A0A1B0GTC6 90 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 EEF1E1-BLOC1S5C9J1V9 151 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 H0YL77 283 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 SYS1-DBNDD2H3BUS1 97 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 SLC17A2O00624 439 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 OVOL1O14753 267 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 DUSP14O95147 198 aaKnown RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 IGFBP3P17936 291 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 CAV3P56539 151 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 RND3P61587 244 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 OR1C1Q15619 314 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 DMRTC1Q5HYR2 192 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 KLF17Q5JT82 389 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 IBA57Q5T440 356 aaKnown RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 NCBP2-AS2Q69YL0 99 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 C12orf73Q69YU5 71 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 Q6ZSR3 168 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 CYP2G1PQ6ZSU1 146 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 CYB561D1Q8N8Q1 229 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 Q8N976 141 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 MDS2Q8NDY4 140 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 SGMS2Q8NHU3 365 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 LINC01560Q8TB33 94 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 LSM10Q969L4 123 aaKnown RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 KCNS1Q96KK3 526 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 SCGB3A2Q96PL1 93 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 MRPL20Q9BYC9 149 aaKnown RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 DEFB126Q9BYW3 111 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM222Q9H0R3 208 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 RNASE7Q9H1E1 156 aaKnown RBP3.32□□□□□ -1.88
ATXN3-225ENST00000554214 DEFB127Q9H1M4 99 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 RHOJQ9H4E5 214 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 PKIGQ9Y2B9 76 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 KLF12Q9Y4X4 402 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 KIAA1549Q9HCM3 1950 aa3.32□□□□□ -1.88
ATXN3-225ENST00000554214 CHD3Q12873 2000 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms