RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 V9GYV3 84 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 IGHV3-74A0A0B4J1X5 117 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 OR4C46A6NHA9 309 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 COLCA2A8K830 154 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 H3BTX0 84 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 H7BYZ3 331 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 TYMSP04818 313 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 KHDC1LQ5JSQ8 128 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 OR8A1Q8NGG7 326 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 TMEM158Q8WZ71 300 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 SORL1Q92673 2214 aa8.15□□□□□ -1.1
PABPN1-203ENST00000553960 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 HAX1O00165 279 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
PABPN1-203ENST00000553960 ELOBQ15370 118 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 RASL11AQ6T310 242 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 TMEM61Q8N0U2 210 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 ASCL2Q99929 193 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 MCRIP2Q9BUT9 160 aaKnown RBP8.14□□□□□ -1.11
PABPN1-203ENST00000553960 TENM1Q9UKZ4 2725 aa8.14□□□□□ -1.11
PABPN1-203ENST00000553960 TRAV8-1A0A0A6YYK1 113 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 A0A0J9YX75 114 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 A8MWL6 223 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 KLLNB2CW77 178 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 HIST1H1AQ02539 215 aaPredicted RBP8.13□□□□□ -1.11
PABPN1-203ENST00000553960 BTN1A1Q13410 526 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 KRTAP24-1Q3LI83 254 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 COX19Q49B96 90 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 SMUG1Q53HV7 270 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
PABPN1-203ENST00000553960 Q6AWC8 147 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 NUDT10Q8NFP7 164 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 OR10J6PQ8NGY7 276 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 NUDT11Q96G61 164 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 VGLL1Q99990 258 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
PABPN1-203ENST00000553960 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 ZNF705FA8MVS1 300 aaPredicted RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 PRAC2D3DTV9 90 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 SNRPCP09234 159 aaKnown RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 EDN2P20800 178 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 HLA-DMBP28068 263 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 CRIP1P50238 77 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 ERVFC1-1P60608 527 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 RPS20P60866 119 aaKnown RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 RPL19P84098 196 aaKnown RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 KCNIP4Q6PIL6 250 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 RBPMS2Q6ZRY4 209 aaKnown RBP8.12□□□□□ -1.11
PABPN1-203ENST00000553960 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 ZNF738Q8NE65 137 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 ZC2HC1AQ96GY0 325 aa8.12□□□□□ -1.11
PABPN1-203ENST00000553960 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 S100PP25815 95 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
PABPN1-203ENST00000553960 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 CD300EQ496F6 205 aaPredicted RBP8.11□□□□□ -1.11
PABPN1-203ENST00000553960 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 PRNTQ86SH4 94 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 PRIMA1Q86XR5 153 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 CBLN2Q8IUK8 224 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 DYNLRB2Q8TF09 96 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 C20orf144Q9BQM9 153 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 CNFNQ9BYD5 112 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 TP53TG3Q9ULZ0 132 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
PABPN1-203ENST00000553960 XKRY2A2RUG3 117 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 GATCO43716 136 aaKnown RBP8.1□□□□□ -1.11
PABPN1-203ENST00000553960 SCO1O75880 301 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 P01737 135 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 AMBPP02760 352 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 TSPOP30536 169 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 TDRG1Q3Y452 100 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 TMEM88Q6PEY1 159 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 AMTNQ6UX39 209 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 LINC00322Q6ZN03 302 aaPredicted RBP8.1□□□□□ -1.11
PABPN1-203ENST00000553960 LINC00467Q9BRT7 94 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 GPR61Q9BZJ8 451 aa8.1□□□□□ -1.11
PABPN1-203ENST00000553960 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms