RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SLC17A3O00476 420 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 DEFB4AO15263 64 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 ARPC5O15511 151 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 GIG44P09565 113 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 OR10J4P0C629 311 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF705DP0CH99 300 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF705BP0CI00 300 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 LEPP41159 167 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 CDKN1BP46527 198 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 PCP4P48539 62 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 CDC34P49427 236 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 EIF5AP63241 154 aaKnown RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 SERF2P84101 59 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 SPINK13Q1W4C9 94 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 FAM122CQ6P4D5 195 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 PQLC2Q6ZP29 291 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 LYPD1Q8N2G4 141 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 CSNK1G2-AS1Q8NCQ2 148 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 CMTM2Q8TAZ6 248 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 SAT2Q96F10 170 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 PSMG3Q9BT73 122 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 WFDC1Q9HC57 220 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 HUWE1Q7Z6Z7 4374 aaKnown RBP6.05□□□□□ -1.44
PSEN1-209ENST00000553855 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
PSEN1-209ENST00000553855 KANTRA0A1W2PQU2 76 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF705FA8MVS1 300 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-209ENST00000553855 M0R2Z0 102 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 EMP1P54849 157 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 ICAM4Q14773 271 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 Q5BKY6 102 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 AKR1C8PQ5T2L2 129 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 TMEM78Q5T7P6 136 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 TMEM256Q8N2U0 113 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 OR2G3Q8NGZ4 309 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 RXFP4Q8TDU9 374 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 LINC00477Q96M19 166 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 LINC01587Q99440 93 aa6.04□□□□□ -1.44
PSEN1-209ENST00000553855 ACTR3CQ9C0K3 210 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-209ENST00000553855 A8MTW9 85 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 C11orf94C9JXX5 98 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 PFDN1O60925 122 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 SPART-AS1P0CW21 52 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 RAB2AP61019 212 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 SUMO2P61956 95 aaKnown RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 RANP62826 216 aaKnown RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 RPL7L1Q6DKI1 246 aaKnown RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 CEMP1Q6PRD7 247 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 AMTNQ6UX39 209 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF705AQ6ZN79 300 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 IQCF2Q8IXL9 164 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 EXOC3-AS1Q8N2X6 119 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 RPP25LQ8N5L8 163 aaKnown RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 Q8NAQ8 132 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 PHLDA1Q8WV24 401 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-209ENST00000553855 FAM167A-AS1Q96KT0 104 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 C20orf144Q9BQM9 153 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
PSEN1-209ENST00000553855 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 A0A0D9SG52 128 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 RNF222A6NCQ9 220 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 H7BYZ3 331 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 K7EQM0 130 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 M0R3E3 92 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 SCGB1D1O95968 90 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 HTN1P15515 57 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 TAS2R60P59551 318 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
PSEN1-209ENST00000553855 BAP18Q8IXM2 172 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 STOML3Q8TAV4 291 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 FXYD5Q96DB9 178 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 HYLS1Q96M11 299 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 ODF3Q96PU9 254 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 Q9H3A6 140 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 TMEM167BQ9NRX6 74 aa6.02□□□□□ -1.45
PSEN1-209ENST00000553855 TRAV10A0A0B4J240 114 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 PGPA6NDG6 321 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 HMSDA8MTL9 139 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 PRAC2D3DTV9 90 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 SMLR1H3BR10 107 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 HMGB3O15347 200 aaKnown RBP6.01□□□□□ -1.45
PSEN1-209ENST00000553855 NDUFB4O95168 129 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 CXorf1O96002 111 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 SLC25A5P05141 298 aaKnown RBP6.01□□□□□ -1.45
PSEN1-209ENST00000553855 GPX1P07203 203 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 RBMY1A1P0DJD3 496 aaKnown RBP6.01□□□□□ -1.45
PSEN1-209ENST00000553855 RBMY1CP0DJD4 496 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF345Q14585 488 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 RBMY1FQ15415 496 aaKnown RBP6.01□□□□□ -1.45
PSEN1-209ENST00000553855 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 KCNRGQ8N5I3 272 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 C2CD4CQ8TF44 421 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 PHYHIPLQ96FC7 376 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF471Q9BX82 626 aaPredicted RBP6.01□□□□□ -1.45
PSEN1-209ENST00000553855 SH3BGRL3Q9H299 93 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 OTORQ9NRC9 128 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms