RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CRYGDP07320 174 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 SFTA3P0C7M3 94 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 EVI2AP22794 236 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 SRIP30626 198 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 AP3S2P59780 193 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 GUK1Q16774 197 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 C4orf46Q504U0 113 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 MRPL53Q96EL3 112 aaKnown RBP6.1□□□□□ -1.43
SYNE2-209ENST00000553308 SLIRPQ9GZT3 109 aaKnown RBP6.1□□□□□ -1.43
SYNE2-209ENST00000553308 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 RCL1Q9Y2P8 373 aaKnown RBP6.1□□□□□ -1.43
SYNE2-209ENST00000553308 TRBV19A0A075B6N1 114 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 TRGV4A0A0C4DH28 118 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-209ENST00000553308 K7EP13 123 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 RGS13O14921 159 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 TSC22D2O75157 780 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 ZNF253O75346 499 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 GYPEP15421 78 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 SLAQ13239 276 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 PYDC2Q56P42 97 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 ZFAND2AQ8N6M9 145 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-209ENST00000553308 RAB2BQ8WUD1 216 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 MRPL32Q9BYC8 188 aaKnown RBP6.09□□□□□ -1.43
SYNE2-209ENST00000553308 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
SYNE2-209ENST00000553308 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 IGKV2-40A0A087WW87 121 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 PSCAO43653 123 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 NDUFB4O95168 129 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 IGKV2D-40P01614 121 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 GPX1P07203 203 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 CRISP2P16562 243 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 CAMLGP49069 296 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 TAS2R30P59541 319 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 UBE2MP61081 183 aaKnown RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 IAH1Q2TAA2 248 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 NRARPQ7Z6K4 114 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 EXOC3-AS1Q8N2X6 119 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 C10orf126Q8N4M7 172 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 Q8N814 137 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 PCNPQ8WW12 178 aaKnown RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 ZNF479Q96JC4 524 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 ARPC5LQ9BPX5 153 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 GGACTQ9BVM4 153 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 MRPS26Q9BYN8 205 aaKnown RBP6.08□□□□□ -1.44
SYNE2-209ENST00000553308 V9GYH0 126 aa6.08□□□□□ -1.44
SYNE2-209ENST00000553308 C7orf66A4D0T2 115 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 PLA2G1BP04054 148 aaKnown RBP6.07□□□□□ -1.44
SYNE2-209ENST00000553308 PYYP10082 97 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 Q6ZRG5 221 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 C9orf47Q6ZRZ4 202 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 OR1L4Q8NGR5 311 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 GSKIPQ9P0R6 139 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 FLVCR2Q9UPI3 526 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 PRELID1Q9Y255 219 aa6.07□□□□□ -1.44
SYNE2-209ENST00000553308 LOC100131303A0A0U1RQF7 123 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 MBPP02686 304 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-209ENST00000553308 TMBIM6P55061 237 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 MUC21Q5SSG8 566 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 FAM122CQ6P4D5 195 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 IQCF2Q8IXL9 164 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 OR10G4Q8NGN3 311 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 Q8TAT8 98 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 BLNKQ8WV28 456 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 DEDD2Q8WXF8 326 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 PFDN5Q99471 154 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 SRRQ9GZT4 340 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 Q9HAA7 133 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 SLC39A9Q9NUM3 307 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 TIMM9Q9Y5J7 89 aa6.06□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-38A0A0C4DH36 116 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 UBE2L5PA0A1B0GUS4 154 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 C9JCJ5 164 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 H3BMQ9 156 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 CST7O76096 145 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 NDUFB6O95139 128 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 C1QBP02746 253 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 ORM1P02763 201 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 NMBP08949 121 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 HIST1H1EP10412 219 aaKnown RBP6.05□□□□□ -1.44
SYNE2-209ENST00000553308 RAB31Q13636 194 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 PDE6HQ13956 83 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 WFDC2Q14508 124 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 TMEM78Q5T7P6 136 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 Q6ZSA8 131 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 DEFB104AQ8WTQ1 72 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 BCL7BQ9BQE9 202 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 TXNDC17Q9BRA2 123 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 TMEM14CQ9P0S9 112 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 WDR83OSQ9Y284 106 aa6.05□□□□□ -1.44
SYNE2-209ENST00000553308 IBA57-AS1B1ANH7 110 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 L7N2F9 121 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 CCSO14618 274 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms