RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
NEK3-204ENST00000552973 FGF7P21781 194 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 S100A11P31949 105 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 SULT1A1P50225 295 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 DAZ2Q13117 558 aaKnown RBP7.91□□□□□ -1.14
NEK3-204ENST00000552973 RAB32Q13637 225 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 VWC2Q2TAL6 325 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 Q6ZQT7 251 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 C11orf72Q8NBR9 251 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 UPK3BQ9BT76 320 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 NUDT15Q9NV35 164 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 MUC4Q99102 2169 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 H3BNG1 76 aa7.9□□□□□ -1.14
NEK3-204ENST00000552973 ZNF253O75346 499 aa7.9□□□□□ -1.14
NEK3-204ENST00000552973 ZNF324O75467 553 aaPredicted RBP7.9□□□□□ -1.14
NEK3-204ENST00000552973 HIST1H1EP10412 219 aaKnown RBP7.9□□□□□ -1.14
NEK3-204ENST00000552973 MRPL53Q96EL3 112 aaKnown RBP7.9□□□□□ -1.14
NEK3-204ENST00000552973 SCRT2Q9NQ03 307 aa7.9□□□□□ -1.14
NEK3-204ENST00000552973 LYRM2Q9NU23 88 aaPredicted RBP7.9□□□□□ -1.14
NEK3-204ENST00000552973 TP53TG3Q9ULZ0 132 aa7.9□□□□□ -1.14
NEK3-204ENST00000552973 FUT9Q9Y231 359 aa7.9□□□□□ -1.14
NEK3-204ENST00000552973 IGKV2-40A0A087WW87 121 aaPredicted RBP7.89□□□□□ -1.15
NEK3-204ENST00000552973 KLLNB2CW77 178 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 IGKV2D-40P01614 121 aaPredicted RBP7.89□□□□□ -1.15
NEK3-204ENST00000552973 GPX1P07203 203 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
NEK3-204ENST00000552973 LINC00315P59091 139 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 IL15RAQ13261 267 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 ICAM4Q14773 271 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 PRR9Q5T870 116 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 FAM122CQ6P4D5 195 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 STX12Q86Y82 276 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 EIF4E3Q8N5X7 224 aaKnown RBP7.89□□□□□ -1.15
NEK3-204ENST00000552973 ZNF680Q8NEM1 530 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 FAM19A4Q96LR4 140 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 VGLL1Q99990 258 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 GPN1Q9HCN4 374 aaPredicted RBP7.89□□□□□ -1.15
NEK3-204ENST00000552973 MRPL16Q9NX20 251 aaKnown RBP7.89□□□□□ -1.15
NEK3-204ENST00000552973 TMEM14CQ9P0S9 112 aa7.89□□□□□ -1.15
NEK3-204ENST00000552973 A0A1W2PPQ1 181 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 SPINK4O60575 86 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 MPDU1O75352 247 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 HBG1P69891 147 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 HBG2P69892 147 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 NHLH2Q02577 135 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 ATP6V1FQ16864 119 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 Q8N1X5 172 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 SLC25A2Q9BXI2 301 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 NPCDR1Q9BY65 106 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 AAMDCQ9H7C9 122 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 PRELID1Q9Y255 219 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
NEK3-204ENST00000552973 RGS13O14921 159 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 SIVA1O15304 175 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 PAX4O43316 350 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 SIX6O95475 246 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 TCL1AP56279 114 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 TMEM78Q5T7P6 136 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 C9orf47Q6ZRZ4 202 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 LINC00467Q9BRT7 94 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 ZNF492Q9P255 531 aa7.87□□□□□ -1.15
NEK3-204ENST00000552973 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
NEK3-204ENST00000552973 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 FAM240BA0A1B0GVZ2 78 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 PRAF2O60831 178 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 NXPH4O95158 308 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 OR10J4P0C629 311 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 NBEAP1P0C6P0 100 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 CRISP2P16562 243 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 BTF3P20290 206 aaKnown RBP7.86□□□□□ -1.15
NEK3-204ENST00000552973 PDE6HQ13956 83 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 OR5C1Q8NGR4 320 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 Q8TAT8 98 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 FAM167A-AS1Q96KT0 104 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 C18orf15Q96N68 181 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 C8orf49Q96NF6 230 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 ARPC5LQ9BPX5 153 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 OR51M1Q9H341 326 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 ICOSQ9Y6W8 199 aa7.86□□□□□ -1.15
NEK3-204ENST00000552973 LRRC37A5PQ49AS3 106 aa7.85□□□□□ -1.15
NEK3-204ENST00000552973 MUC21Q5SSG8 566 aa7.85□□□□□ -1.15
NEK3-204ENST00000552973 Q6ZRN7 208 aaPredicted RBP7.85□□□□□ -1.15
NEK3-204ENST00000552973 ST6GAL2Q96JF0 529 aa7.85□□□□□ -1.15
NEK3-204ENST00000552973 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
NEK3-204ENST00000552973 OR5AC2Q9NZP5 309 aa7.85□□□□□ -1.15
NEK3-204ENST00000552973 E5RGE8 158 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 ZNF138P52744 262 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 CRYBA4P53673 196 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
NEK3-204ENST00000552973 FHL2Q14192 279 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 IBA57Q5T440 356 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms