RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NDFIP1Q9BT67 221 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 HERC2O95714 4834 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 SERTM2A0A1B0GWG4 89 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 FAM74A7A6NL05 159 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF705DP0CH99 300 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF705BP0CI00 300 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 TSPOP30536 169 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 AKR1C3P42330 323 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 CNN1P51911 297 aaKnown RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 UBE2G1P62253 170 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 GNG5P63218 68 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 C1QTNF4Q9BXJ3 329 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 YTHDF2Q9Y5A9 579 aaKnown RBP8.36□□□□□ -1.07
TMEM116-218ENST00000552839 KMT2AQ03164 3969 aa8.36□□□□□ -1.07
TMEM116-218ENST00000552839 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 H3BMM0 161 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 BCL2P10415 239 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 LEPP41159 167 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 GDF5OSQ5U4N7 250 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
TMEM116-218ENST00000552839 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 SUN5Q8TC36 379 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 ATG101Q9BSB4 218 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 EIF5A2Q9GZV4 153 aaKnown RBP8.35□□□□□ -1.07
TMEM116-218ENST00000552839 CSTL1Q9H114 145 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
TMEM116-218ENST00000552839 PRAC2D3DTV9 90 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 J3KRW8 73 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 PEX7O00628 323 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 UBE2CO00762 179 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 INSP01308 110 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 AMBPP02760 352 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 ATP5G3P48201 142 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 FXYD7P58549 80 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 PCNPQ8WW12 178 aaKnown RBP8.34□□□□□ -1.07
TMEM116-218ENST00000552839 HIST1H2BAQ96A08 127 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 TXNDC17Q9BRA2 123 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
TMEM116-218ENST00000552839 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 FBLL1A6NHQ2 334 aaKnown RBP8.33□□□□□ -1.08
TMEM116-218ENST00000552839 NPIPB6E9PJ23 425 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 TCRAP04437 139 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 ZNF138P52744 262 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 CEBPGP53567 150 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 CCL20P78556 96 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 MEF2BQ02080 365 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-218ENST00000552839 ERCC8Q13216 396 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 SPINK13Q1W4C9 94 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 TOR2AQ5JU69 321 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 ARL6IP6Q8N6S5 226 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 KIR2DL5BQ8NHK3 375 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 VAX2Q9UIW0 290 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
TMEM116-218ENST00000552839 M0R2Z0 102 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 PDE6DO43924 150 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 CDKN1BP46527 198 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 DEFB135Q30KP9 77 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 Q8TAT8 98 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 GOLT1BQ9Y3E0 138 aa8.32□□□□□ -1.08
TMEM116-218ENST00000552839 AGRNO00468 2067 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 IGHV3OR16-12A0A075B7B8 117 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 LOC102723971A0A1B0GUV8 181 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 CXorf65A6NEN9 183 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 GPX1P07203 203 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 FLI1Q01543 452 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-218ENST00000552839 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 SGK494Q96LW2 274 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 VGLL1Q99990 258 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 MED9Q9NWA0 146 aa8.31□□□□□ -1.08
TMEM116-218ENST00000552839 TRAV8-1A0A0A6YYK1 113 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 S100A9P06702 114 aaKnown RBP8.3□□□□□ -1.08
TMEM116-218ENST00000552839 NMBP08949 121 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 CT45A10P0DMU9 189 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 AGPAT4-IT1Q9H0P7 198 aa8.3□□□□□ -1.08
TMEM116-218ENST00000552839 ZNF492Q9P255 531 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms