RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 CLEC5AQ9NY25 188 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 DOK5Q9P104 306 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 SMCO3A2RU48 225 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 RNASE2P10153 161 aaKnown RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 CRYBB3P26998 211 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 SPCS3P61009 180 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 SPANXN5Q5MJ07 72 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 LCN15Q6UWW0 184 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 GGACTQ9BVM4 153 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 NPCDR1Q9BY65 106 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 INS-IGF2F8WCM5 200 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 MPDU1O75352 247 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 TYMSP04818 313 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 IL4P05112 153 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 RBMY1A1P0DJD3 496 aaKnown RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 OR10J1P30954 320 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 ID1P41134 155 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 EMP1P54849 157 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 ZNF674Q2M3X9 581 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 RNASEH2CQ8TDP1 164 aaKnown RBP6.31□□□□□ -1.4
TMEM116-217ENST00000552801 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 XCL2Q9UBD3 114 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
TMEM116-217ENST00000552801 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 PRSS46E5RG02 174 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 PPP1R2P9O14990 202 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 SPART-AS1P0CW21 52 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 RD3LP0DJH9 198 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 FGF7P21781 194 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 S100A2P29034 98 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 PSMB3P49720 205 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 RPL23P62829 140 aaKnown RBP6.3□□□□□ -1.4
TMEM116-217ENST00000552801 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 SIGLEC15Q6ZMC9 328 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 POM121L12Q8N7R1 296 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 SLC24A4Q8NFF2 622 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 SMIM7Q9BQ49 75 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-217ENST00000552801 NRN1Q9NPD7 142 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 AGRNO00468 2067 aa6.3□□□□□ -1.4
TMEM116-217ENST00000552801 TEX48A0A1B0GUV7 120 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 C17orf112F2Z3M2 114 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 M0R2N4 97 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
TMEM116-217ENST00000552801 AMBPP02760 352 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 TRGC2P03986 189 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 TRGC1P0CF51 173 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 CEBPGP53567 150 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 FGF8P55075 233 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-217ENST00000552801 YPEL3P61236 119 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-217ENST00000552801 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 OR10G9Q8NGN4 311 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 OR10G7Q8NGN6 311 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 DCANP1Q8TF63 244 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 FRZBQ92765 325 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 IMMP2LQ96T52 175 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 PARLQ9H300 379 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 FNDC4Q9H6D8 234 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-217ENST00000552801 SLC25A22Q9H936 323 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 KCNIP2Q9NS61 270 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 SLC39A9Q9NUM3 307 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 URGCP-MRPS24S4R325 110 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 X6R8D5 127 aa6.29□□□□□ -1.4
TMEM116-217ENST00000552801 SMIM9A6NGZ8 99 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 FNDC10F2Z333 226 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 PDE6DO43924 150 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 IGKV3-20P01619 116 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 HTN3P15516 51 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 CDC34P49427 236 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-217ENST00000552801 NDUFA6P56556 154 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 FAM3BP58499 235 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-217ENST00000552801 C12orf74Q32Q52 190 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 BSXQ3C1V8 233 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 ACOT6Q3I5F7 207 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-217ENST00000552801 FFAR4Q5NUL3 377 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 OR8G2PQ6IF36 304 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 EBLN2Q6P2I7 272 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 TMEM183AQ8IXX5 376 aa6.28□□□□□ -1.4
TMEM116-217ENST00000552801 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms