RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 ZANQ9Y493 2812 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 PYY3Q5JQD4 70 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 ELANEP08246 267 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 SLAQ13239 276 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 TM4SF20Q53R12 229 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 APCP25054 2843 aa11.88□□□□□ -0.51
SCN8A-206ENST00000550891 IGHV7-4-1A0A0J9YVY3 117 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
SCN8A-206ENST00000550891 CRIP1P50238 77 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 Q0VG73 95 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 SERF1AO75920 110 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 ORM1P02763 201 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 FOXE3Q13461 319 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 C10orf99Q6UWK7 81 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
SCN8A-206ENST00000550891 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
SCN8A-206ENST00000550891 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
SCN8A-206ENST00000550891 A8MWP6 167 aa11.86□□□□□ -0.51
SCN8A-206ENST00000550891 A0A1B0GXF2 115 aa11.86□□□□□ -0.51
SCN8A-206ENST00000550891 ZNF138P52744 262 aa11.86□□□□□ -0.51
SCN8A-206ENST00000550891 TRAV8-2A0A0B4J237 113 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 GPHB5Q86YW7 130 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 SSTP61278 116 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 PAFAH1B2P68402 229 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 OR10J6PQ8NGY7 276 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 K7EMT4 169 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 FOXA3P55318 350 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-206ENST00000550891 SMPXQ9UHP9 88 aa11.85□□□□□ -0.51
SCN8A-206ENST00000550891 HELZ2Q9BYK8 2649 aaKnown RBP11.84□□□□□ -0.51
SCN8A-206ENST00000550891 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 AGPAT4-IT1Q9H0P7 198 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 A0A1B0GW15 77 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 HAX1O00165 279 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
SCN8A-206ENST00000550891 ARMS2P0C7Q2 107 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 YAE1D1Q9NRH1 226 aa11.84□□□□□ -0.51
SCN8A-206ENST00000550891 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-206ENST00000550891 OVOL1O14753 267 aa11.83□□□□□ -0.52
SCN8A-206ENST00000550891 NUPR1O60356 82 aa11.83□□□□□ -0.52
SCN8A-206ENST00000550891 S100A12P80511 92 aa11.83□□□□□ -0.52
SCN8A-206ENST00000550891 UBE2E2Q96LR5 201 aa11.83□□□□□ -0.52
SCN8A-206ENST00000550891 TEX15Q9BXT5 2789 aa11.83□□□□□ -0.52
SCN8A-206ENST00000550891 ID1P41134 155 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 FOXC2Q99958 501 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
SCN8A-206ENST00000550891 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 AMTP48728 403 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-206ENST00000550891 TMEM86BQ8N661 226 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 F2Z2F3 143 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-206ENST00000550891 LYZL1Q6UWQ5 148 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 C9orf47Q6ZRZ4 202 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
SCN8A-206ENST00000550891 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 M0QZ24 198 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 SRD5A1P18405 259 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 PMCHP20382 165 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 PRR31Q5SQ13 230 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 WFDC3Q8IUB2 231 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 HSBP1O75506 76 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 KLHDC1Q8N7A1 406 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 KCNS1Q96KK3 526 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 LINC00477Q96M19 166 aa11.81□□□□□ -0.52
SCN8A-206ENST00000550891 ALKBH7Q9BT30 221 aaPredicted RBP11.81□□□□□ -0.52
SCN8A-206ENST00000550891 FAM181BA6NEQ2 426 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
SCN8A-206ENST00000550891 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
SCN8A-206ENST00000550891 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
SCN8A-206ENST00000550891 ESDP10768 282 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 IQCJQ1A5X6 159 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 NTF3P20783 257 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 DPF1Q92782 380 aa11.8□□□□□ -0.52
SCN8A-206ENST00000550891 RNASEKQ6P5S7 137 aaKnown RBP11.79□□□□□ -0.52
SCN8A-206ENST00000550891 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
SCN8A-206ENST00000550891 MYO9AB2RTY4 2548 aa11.79□□□□□ -0.52
SCN8A-206ENST00000550891 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
SCN8A-206ENST00000550891 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 A0A087WW49 117 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
SCN8A-206ENST00000550891 J3KRW8 73 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 TFPI2P48307 235 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 TWIST1Q15672 202 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms