RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
NR4A1-215ENST00000550557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.86
NR4A1-215ENST00000550557 H3BUA1 57 aa9.71□□□□□ -0.86
NR4A1-215ENST00000550557 PSG3Q16557 428 aa9.71□□□□□ -0.86
NR4A1-215ENST00000550557 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
NR4A1-215ENST00000550557 JKAMPQ9P055 326 aa9.71□□□□□ -0.86
NR4A1-215ENST00000550557 DEFB136Q30KP8 78 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 ST20Q9HBF5 79 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 LY96Q9Y6Y9 160 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 LHBP01229 141 aa9.7□□□□□ -0.86
NR4A1-215ENST00000550557 SEPSECSQ9HD40 501 aaKnown RBP9.7□□□□□ -0.86
NR4A1-215ENST00000550557 YPEL3P61236 119 aaPredicted RBP9.7□□□□□ -0.86
NR4A1-215ENST00000550557 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
NR4A1-215ENST00000550557 ZNF134P52741 427 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 CACNG7P62955 275 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 FOXC2Q99958 501 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 HBDP02042 147 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 LGALS1P09382 135 aaKnown RBP9.69□□□□□ -0.86
NR4A1-215ENST00000550557 HOXD3P31249 432 aaPredicted RBP9.69□□□□□ -0.86
NR4A1-215ENST00000550557 FOXE3Q13461 319 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 TPSG1Q9NRR2 321 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 H3BRM9 83 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
NR4A1-215ENST00000550557 MS4A6AQ9H2W1 248 aa9.69□□□□□ -0.86
NR4A1-215ENST00000550557 A0A1B0GWB2 263 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 HAPLN4Q86UW8 402 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 OR5A1Q8NGJ0 315 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 CD5LO43866 347 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 LINC00614P0C842 121 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 SEC11AP67812 179 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 C18orf15Q96N68 181 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 EPG5Q9HCE0 2579 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 EREGO14944 169 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 C8orf31Q8N9H6 132 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
NR4A1-215ENST00000550557 Q8TAT8 98 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
NR4A1-215ENST00000550557 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 TYMSP04818 313 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 GP9P14770 177 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
NR4A1-215ENST00000550557 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
NR4A1-215ENST00000550557 F2Z2F3 143 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 IGFBPL1Q8WX77 278 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 IFI27P40305 119 aaPredicted RBP9.66□□□□□ -0.86
NR4A1-215ENST00000550557 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 EML6Q6ZMW3 1958 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 OR13C6PQ8NH95 151 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
NR4A1-215ENST00000550557 DOPEY1Q5JWR5 2465 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 TMEM86BQ8N661 226 aa9.66□□□□□ -0.86
NR4A1-215ENST00000550557 DNAJC9-AS1A6NH13 148 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 DPM2O94777 84 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.86
NR4A1-215ENST00000550557 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 WDR87Q6ZQQ6 2873 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 TCRAP04437 139 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 IGHV4-31P0DP07 118 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.86
NR4A1-215ENST00000550557 DOCK11Q5JSL3 2073 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 GHRHP01286 108 aa9.65□□□□□ -0.86
NR4A1-215ENST00000550557 TNCP24821 2201 aa9.65□□□□□ -0.87
NR4A1-215ENST00000550557 IGHV7-4-1A0A0J9YVY3 117 aa9.65□□□□□ -0.87
NR4A1-215ENST00000550557 DLEU1O43261 78 aa9.65□□□□□ -0.87
NR4A1-215ENST00000550557 FNDC10F2Z333 226 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 WT1-ASQ06250 92 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 HSD52Q0P140 79 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 TLN2Q9Y4G6 2542 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 LMO4P61968 165 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 DSCAMO60469 2012 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 LY6G6DO95868 133 aa9.64□□□□□ -0.87
NR4A1-215ENST00000550557 SLURP1P55000 103 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 CFHR3Q02985 330 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 MYCNOSP40205 109 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 PDE6HQ13956 83 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 NUDT10Q8NFP7 164 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 NUDT11Q96G61 164 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 IGKV3D-20A0A0C4DH25 116 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 H3BUT2 72 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 MSMPQ1L6U9 139 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
NR4A1-215ENST00000550557 IFI27L1Q96BM0 104 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 SNHG12Q9BXW3 62 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 RNF182Q8N6D2 247 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms