RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
CACNB3-216ENST00000550391 VGLL1Q99990 258 aa10.49□□□□□ -0.73
CACNB3-216ENST00000550391 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
CACNB3-216ENST00000550391 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-216ENST00000550391 TRAV8-1A0A0A6YYK1 113 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 C9JCJ5 164 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 F6UB75 175 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 ADCYAP1P18509 176 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 DEFB1P60022 68 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 FLI1Q01543 452 aaPredicted RBP10.48□□□□□ -0.73
CACNB3-216ENST00000550391 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
CACNB3-216ENST00000550391 ERCC8Q13216 396 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 CENPWQ5EE01 88 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 TMEM78Q5T7P6 136 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 PRNTQ86SH4 94 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 SGK494Q96LW2 274 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 NIPSNAP3BQ9BS92 247 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
CACNB3-216ENST00000550391 NOTCH3Q9UM47 2321 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 A0A0J9YX75 114 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
CACNB3-216ENST00000550391 CD7P09564 240 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 ZNF705DP0CH99 300 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-216ENST00000550391 ZNF705BP0CI00 300 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-216ENST00000550391 GNG4P50150 75 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 ZNF138P52744 262 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 OXLD1Q5BKU9 147 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 Q86TA4 180 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 BAGE2Q86Y30 109 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 C19orf73Q9NVV2 129 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
CACNB3-216ENST00000550391 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
CACNB3-216ENST00000550391 TRBV20OR9-2A0A075B6H5 130 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 ATP6V1G1O75348 118 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 LTAP01374 205 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 SAPCD1Q5SSQ6 148 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 GDF5OSQ5U4N7 250 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 GTSCR1Q86UQ5 136 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 APRG1Q8IVJ8 170 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 IGF2BP2-AS1Q96M15 143 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 ZMAT5Q9UDW3 170 aaKnown RBP10.46□□□□□ -0.73
CACNB3-216ENST00000550391 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 LY96Q9Y6Y9 160 aa10.46□□□□□ -0.73
CACNB3-216ENST00000550391 KNCNA6PVL3 124 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 CT45A10P0DMU9 189 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 EGFEM1PQ0D2K5 195 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 Q8TAT8 98 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 SDF2L1Q9HCN8 221 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
CACNB3-216ENST00000550391 H3BMM0 161 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 S100A1P23297 94 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 ZNF124Q15973 351 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 TMEM183AQ8IXX5 376 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 TVP23CQ96ET8 276 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 ODF3Q96PU9 254 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 PRR25Q96S07 402 aa10.44□□□□□ -0.74
CACNB3-216ENST00000550391 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
CACNB3-216ENST00000550391 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 A8MTW9 85 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 IGLV2-8P01709 118 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 RPL23P62829 140 aaKnown RBP10.43□□□□□ -0.74
CACNB3-216ENST00000550391 PNRC1Q12796 327 aaPredicted RBP10.43□□□□□ -0.74
CACNB3-216ENST00000550391 LINC01551Q86U37 167 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 STHQ8IWL8 128 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 MLST8Q9BVC4 326 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
CACNB3-216ENST00000550391 AGRNO00468 2067 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 G3V4G9 280 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 APOC3P02656 99 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
CACNB3-216ENST00000550391 LEPP41159 167 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 ADIRFQ15847 76 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 COX8CQ7Z4L0 72 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 NHLRC2Q8NBF2 726 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 FAM19A4Q96LR4 140 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 ASCL2Q99929 193 aa10.42□□□□□ -0.74
CACNB3-216ENST00000550391 AURKAIP1Q9NWT8 199 aaPredicted RBP10.42□□□□□ -0.74
CACNB3-216ENST00000550391 K7EN84 100 aa10.41□□□□□ -0.74
CACNB3-216ENST00000550391 GCGP01275 180 aa10.41□□□□□ -0.74
CACNB3-216ENST00000550391 CRISP2P16562 243 aa10.41□□□□□ -0.74
CACNB3-216ENST00000550391 TSPOP30536 169 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms