RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PGPA6NDG6 321 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 GGTLC3B5MD39 225 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 PAGE4O60829 102 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
NUP188-211ENST00000550219 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.86
NUP188-211ENST00000550219 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 RAB14P61106 215 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 ICAM4Q14773 271 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.86
NUP188-211ENST00000550219 CCDC28AQ8IWP9 274 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.86
NUP188-211ENST00000550219 M0R3E3 92 aa9.7□□□□□ -0.86
NUP188-211ENST00000550219 MIFP14174 115 aa9.7□□□□□ -0.86
NUP188-211ENST00000550219 TAGLN2P37802 199 aaKnown RBP9.7□□□□□ -0.86
NUP188-211ENST00000550219 UBE2G2P60604 165 aa9.7□□□□□ -0.86
NUP188-211ENST00000550219 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
NUP188-211ENST00000550219 RXFP4Q8TDU9 374 aa9.7□□□□□ -0.86
NUP188-211ENST00000550219 GNG13Q9P2W3 67 aa9.7□□□□□ -0.86
NUP188-211ENST00000550219 ZNF705FA8MVS1 300 aaPredicted RBP9.69□□□□□ -0.86
NUP188-211ENST00000550219 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 IFNA1P01562 189 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 BCL2P10415 239 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 Q6ZTC4 211 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 RPUSD4Q96CM3 377 aaKnown RBP9.69□□□□□ -0.86
NUP188-211ENST00000550219 TXNDC17Q9BRA2 123 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 TCEAL7Q9BRU2 100 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 X6R8D5 127 aa9.69□□□□□ -0.86
NUP188-211ENST00000550219 LOC102723971A0A1B0GUV8 181 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 PRAC2D3DTV9 90 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 ATP5G3P48201 142 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 CST9LP1Q5W188 147 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 ZNF738Q8NE65 137 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 OR8A1Q8NGG7 326 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 FAM210AQ96ND0 272 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 SAV1Q9H4B6 383 aaPredicted RBP9.68□□□□□ -0.86
NUP188-211ENST00000550219 APLNQ9ULZ1 77 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 EPDR1Q9UM22 224 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
NUP188-211ENST00000550219 TRAV10A0A0B4J240 114 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 A0A0J9YX75 114 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 RBAKDNA6NC62 111 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 RBFOX3A6NFN3 312 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 A8MTW9 85 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 DIRC3C9JPN6 131 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
NUP188-211ENST00000550219 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
NUP188-211ENST00000550219 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 CSN1S1P47710 185 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 TCTAP57738 103 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 DEFB1P60022 68 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 CMTM2Q8TAZ6 248 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
NUP188-211ENST00000550219 IGHV4-4A0A075B6R2 117 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 F6UB75 175 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 H3BMM0 161 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 IGKV3-20P01619 116 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 TCRAP04437 139 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
NUP188-211ENST00000550219 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 CLUHP3Q96NS8 147 aa9.66□□□□□ -0.86
NUP188-211ENST00000550219 FXYD7P58549 80 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 NUTF2P61970 127 aaKnown RBP9.65□□□□□ -0.86
NUP188-211ENST00000550219 GNG5P63218 68 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 EBLN2Q6P2I7 272 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 C9orf47Q6ZRZ4 202 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 CSNK1G2-AS1Q8NCQ2 148 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 ATG101Q9BSB4 218 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
NUP188-211ENST00000550219 AGRNO00468 2067 aa9.65□□□□□ -0.87
NUP188-211ENST00000550219 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
NUP188-211ENST00000550219 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 F6UZH7 168 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 PEX7O00628 323 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 PDE6DO43924 150 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 DUSP14O95147 198 aaKnown RBP9.64□□□□□ -0.87
NUP188-211ENST00000550219 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
NUP188-211ENST00000550219 PRB4P10163 310 aaPredicted RBP9.64□□□□□ -0.87
NUP188-211ENST00000550219 TOR2AQ5JU69 321 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 GOLT1AQ6ZVE7 132 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 VGLL1Q99990 258 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 AGPAT4-IT1Q9H0P7 198 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 PPP1R14DQ9NXH3 145 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
NUP188-211ENST00000550219 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms