RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CENPWQ5EE01 88 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 Q86TA4 180 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 GTSCR1Q86UQ5 136 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 LINC00479Q96M42 142 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 SAV1Q9H4B6 383 aaPredicted RBP12.96□□□□□ -0.33
LETMD1-220ENST00000549686 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 A0A0J9YX75 114 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 ATP6V1G1O75348 118 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 ZNF138P52744 262 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
LETMD1-220ENST00000549686 VGLL1Q99990 258 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 ANK2Q01484 3957 aa12.95□□□□□ -0.34
LETMD1-220ENST00000549686 TRAV8-1A0A0A6YYK1 113 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 ODF3L2Q3SX64 289 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 PRNTQ86SH4 94 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 BIN3Q9NQY0 253 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
LETMD1-220ENST00000549686 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
LETMD1-220ENST00000549686 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
LETMD1-220ENST00000549686 CLUHP3Q96NS8 147 aa12.93□□□□□ -0.34
LETMD1-220ENST00000549686 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
LETMD1-220ENST00000549686 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
LETMD1-220ENST00000549686 TRBV20OR9-2A0A075B6H5 130 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 F6UB75 175 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 ERCC8Q13216 396 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 COX8CQ7Z4L0 72 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 SVBPQ8N300 66 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 PRR25Q96S07 402 aa12.92□□□□□ -0.34
LETMD1-220ENST00000549686 A8MTW9 85 aa12.91□□□□□ -0.34
LETMD1-220ENST00000549686 ACTL10Q5JWF8 245 aa12.91□□□□□ -0.34
LETMD1-220ENST00000549686 LINC01551Q86U37 167 aa12.91□□□□□ -0.34
LETMD1-220ENST00000549686 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
LETMD1-220ENST00000549686 H3BMM0 161 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 APOC3P02656 99 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 CD7P09564 240 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 TSPOP30536 169 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 EGFEM1PQ0D2K5 195 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 OCC1Q8TAD7 63 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 C19orf73Q9NVV2 129 aa12.9□□□□□ -0.34
LETMD1-220ENST00000549686 B4DEV8 164 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 SNAPINO95295 136 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-220ENST00000549686 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-220ENST00000549686 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 CRISP2P16562 243 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 LEPP41159 167 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 DEFB1P60022 68 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 RPL23P62829 140 aaKnown RBP12.89□□□□□ -0.35
LETMD1-220ENST00000549686 SMUG1Q53HV7 270 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 STHQ8IWL8 128 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 Q8TAT8 98 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 TRRAPQ9Y4A5 3859 aa12.89□□□□□ -0.35
LETMD1-220ENST00000549686 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 GCGP01275 180 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 IGLV2-8P01709 118 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 PRB4P10163 310 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-220ENST00000549686 ADIRFQ15847 76 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 OR4B1Q8NGF8 309 aa12.88□□□□□ -0.35
LETMD1-220ENST00000549686 M0R036 132 aa12.87□□□□□ -0.35
LETMD1-220ENST00000549686 MGST1P10620 155 aaKnown RBP12.87□□□□□ -0.35
LETMD1-220ENST00000549686 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
LETMD1-220ENST00000549686 VWFP04275 2813 aa12.87□□□□□ -0.35
LETMD1-220ENST00000549686 PGPEP1LA6NFU8 196 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 AMBPP02760 352 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 NUTF2P61970 127 aaKnown RBP12.86□□□□□ -0.35
LETMD1-220ENST00000549686 RHEBQ15382 184 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 TRPT1Q86TN4 253 aaKnown RBP12.86□□□□□ -0.35
LETMD1-220ENST00000549686 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 CLRN3Q8NCR9 226 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 ISOC2Q96AB3 205 aa12.86□□□□□ -0.35
LETMD1-220ENST00000549686 K7EN84 100 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 CDKN1BP46527 198 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 ZNF124Q15973 351 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 FAM231DQ6ZW35 169 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 ASCL2Q99929 193 aa12.85□□□□□ -0.35
LETMD1-220ENST00000549686 KLLNB2CW77 178 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 C15orf54Q8N8G6 183 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 DAZAP1Q96EP5 407 aaKnown RBP12.84□□□□□ -0.35
LETMD1-220ENST00000549686 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms