RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LOC107986453A0A1B0GWG9 222 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 H3BRM9 83 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 UQCRQO14949 82 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 OR2H2O95918 312 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 CKS1BP61024 79 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 GLIPR1L1Q6UWM5 242 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 C10orf105Q8TEF2 133 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 PSMF1Q92530 271 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 AP1S3Q96PC3 154 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 MRPL57Q9BQC6 102 aaKnown RBP1.44□□□□□ -2.18
SNRPF-202ENST00000549580 DIDO1Q9BTC0 2240 aaKnown RBP1.44□□□□□ -2.18
SNRPF-202ENST00000549580 RFX7Q2KHR2 1363 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 COL24A1Q17RW2 1714 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 DSPPQ9NZW4 1301 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 CCL25O15444 150 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 DNAL4O96015 105 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 HBDP02042 147 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 MORN2Q502X0 79 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 GDF5OSQ5U4N7 250 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 Q5XG85 94 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 HAGHLQ6PII5 290 aaPredicted RBP1.43□□□□□ -2.18
SNRPF-202ENST00000549580 FOXI2Q6ZQN5 318 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 LINC00269Q8N2A0 174 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 MAGOHBQ96A72 148 aaKnown RBP1.43□□□□□ -2.18
SNRPF-202ENST00000549580 LINC00526Q96FQ7 95 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 TMEM138Q9NPI0 162 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 FKBP11Q9NYL4 201 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 TMEM14CQ9P0S9 112 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 ZFP30Q9Y2G7 519 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 PLXNA4Q9HCM2 1894 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 EXPH5Q8NEV8 1989 aa1.43□□□□□ -2.18
SNRPF-202ENST00000549580 KIAA1549Q9HCM3 1950 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 C3orf85A0A1B0GTC6 90 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 A0A1B0GW64 132 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 MT-ND4LP03901 98 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 TCRAP04437 139 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 SLC25A4P12235 298 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 ZNF25P17030 456 aaPredicted RBP1.42□□□□□ -2.18
SNRPF-202ENST00000549580 BLCAPP62952 87 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 S100A12P80511 92 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 MIR22HGQ0VDD5 57 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 HSD17B12Q53GQ0 312 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 TMEM244Q5VVB8 128 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 CASC2Q6XLA1 102 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 NABP2Q9BQ15 211 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 HSPB8Q9UJY1 196 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 MUC6Q6W4X9 2439 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 TNRC6BQ9UPQ9 1833 aaKnown RBP1.42□□□□□ -2.18
SNRPF-202ENST00000549580 ADGRB2O60241 1585 aa1.42□□□□□ -2.18
SNRPF-202ENST00000549580 SMIM24O75264 130 aa1.41□□□□□ -2.18
SNRPF-202ENST00000549580 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
SNRPF-202ENST00000549580 ETV6P41212 452 aa1.41□□□□□ -2.18
SNRPF-202ENST00000549580 LINC00322Q6ZN03 302 aaPredicted RBP1.41□□□□□ -2.18
SNRPF-202ENST00000549580 OR4S1Q8NGB4 309 aa1.41□□□□□ -2.18
SNRPF-202ENST00000549580 CECR2Q9BXF3 1484 aa1.41□□□□□ -2.18
SNRPF-202ENST00000549580 ZFC3H1O60293 1989 aaKnown RBP1.41□□□□□ -2.18
SNRPF-202ENST00000549580 CEP152O94986 1710 aa1.4□□□□□ -2.18
SNRPF-202ENST00000549580 HEATR1Q9H583 2144 aaKnown RBP1.4□□□□□ -2.18
SNRPF-202ENST00000549580 TANC2Q9HCD6 1990 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 IGLV3-32A0A0A0MS00 114 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 CCL4P13236 92 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 HIST1H1BP16401 226 aaKnown RBP1.4□□□□□ -2.19
SNRPF-202ENST00000549580 Q6ZSA8 131 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 OBSCN-AS1Q96MR7 158 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 CIB3Q96Q77 187 aaPredicted RBP1.4□□□□□ -2.19
SNRPF-202ENST00000549580 TNFSF18Q9UNG2 199 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 FREM3P0C091 2139 aa1.4□□□□□ -2.19
SNRPF-202ENST00000549580 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
SNRPF-202ENST00000549580 PTPRFP10586 1907 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 LOC107984156A0A0G2JMH3 177 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 IGHV3-33P01772 117 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 ANGP03950 147 aaKnown RBP1.39□□□□□ -2.19
SNRPF-202ENST00000549580 CKS2P33552 79 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 QRFPP83859 136 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 SPRNQ5BIV9 151 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 ARL17AQ8IVW1 177 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 FAM19A2Q8N3H0 131 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 BANF2Q9H503 90 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 MPC1Q9Y5U8 109 aa1.39□□□□□ -2.19
SNRPF-202ENST00000549580 PNMA8CA0A1B0GUJ8 204 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 KLF7O75840 302 aaPredicted RBP1.38□□□□□ -2.19
SNRPF-202ENST00000549580 DNAJB13P59910 316 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 PCBD1P61457 104 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 SARNPP82979 210 aaKnown RBP1.38□□□□□ -2.19
SNRPF-202ENST00000549580 SMIM21Q3B7S5 101 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 ASB16-AS1Q495Z4 193 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 ZCCHC23Q6ZST2 131 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 COPZ2Q9P299 210 aa1.38□□□□□ -2.19
SNRPF-202ENST00000549580 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
SNRPF-202ENST00000549580 TNRC6AQ8NDV7 1962 aaKnown RBP1.38□□□□□ -2.19
SNRPF-202ENST00000549580 POLEQ07864 2286 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 MED13Q9UHV7 2174 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 IFITM5A6NNB3 132 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 BBIP1A8MTZ0 92 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 JMJD7-PLA2G4BH0Y9G9 81 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 EDF1O60869 148 aaKnown RBP1.37□□□□□ -2.19
SNRPF-202ENST00000549580 PPYP01298 95 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 HMGN1P05114 100 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms