RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 THAP8Q8NA92 274 aa8.69□□□□□ -1.02
LINC00661-204ENST00000549354 CST9LQ9H4G1 147 aa8.69□□□□□ -1.02
LINC00661-204ENST00000549354 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
LINC00661-204ENST00000549354 NIPBLQ6KC79 2804 aaeCLIP8.69□□□□□ -1.02
LINC00661-204ENST00000549354 K7EP13 123 aa8.69□□□□□ -1.02
LINC00661-204ENST00000549354 GPR183P32249 361 aa8.69□□□□□ -1.02
LINC00661-204ENST00000549354 C7orf71A4D174 169 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 FCER1GP30273 86 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 CACNG7P62955 275 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 THYN1Q9P016 225 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 KLF12Q9Y4X4 402 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 ZNF785A8K8V0 405 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 SRD5A1P18405 259 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 ZFP36P26651 326 aaKnown RBP8.68□□□□□ -1.02
LINC00661-204ENST00000549354 UFC1Q9Y3C8 167 aa8.68□□□□□ -1.02
LINC00661-204ENST00000549354 GAGE12BA1L429 117 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 IGLV2-11P01706 119 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 IGLC1P0CG04 106 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 CRIP1P50238 77 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 LYZL1Q6UWQ5 148 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 MTURNQ8N3F0 131 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 GLMPQ8WWB7 406 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 DPM3Q9P2X0 92 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 H3BUT2 72 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 LMO4P61968 165 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 CHCHD1Q96BP2 118 aaKnown RBP8.67□□□□□ -1.02
LINC00661-204ENST00000549354 TRGV9Q99603 122 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 SCRT2Q9NQ03 307 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 PSG8Q9UQ74 426 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 G3V318 75 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 CFHR4Q92496 578 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 AP1S3Q96PC3 154 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 HIF1ANQ9NWT6 349 aa8.67□□□□□ -1.02
LINC00661-204ENST00000549354 COTL1Q14019 142 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 VGLL1Q99990 258 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 OOSP1A8MZH6 123 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 OCIAD2Q56VL3 154 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 ZNF747Q9BV97 191 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 AGRNO00468 2067 aa8.66□□□□□ -1.02
LINC00661-204ENST00000549354 LINC01548A6NM66 108 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 CEACAM3P40198 252 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 RHOGP84095 191 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 BBC3Q96PG8 261 aaPredicted RBP8.65□□□□□ -1.02
LINC00661-204ENST00000549354 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 GAGE10A6NGK3 116 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 IGHV4-39P01824 125 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 CSN1S1P47710 185 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 RIGQ13278 110 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 MINOS1Q5TGZ0 78 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 NPBQ8NG41 125 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 OR10AG1Q8NH19 301 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 MINOS1-NBL1R4GNA1 71 aa8.65□□□□□ -1.02
LINC00661-204ENST00000549354 PRRC2AP48634 2157 aaKnown RBP8.65□□□□□ -1.02
LINC00661-204ENST00000549354 CKS2P33552 79 aa8.65□□□□□ -1.03
LINC00661-204ENST00000549354 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.03
LINC00661-204ENST00000549354 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.03
LINC00661-204ENST00000549354 RABAC1Q9UI14 185 aa8.65□□□□□ -1.03
LINC00661-204ENST00000549354 TEX22C9J3V5 150 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
LINC00661-204ENST00000549354 IGHV3-11P01762 117 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 CRYGCP07315 174 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 LY6EQ16553 131 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 PRELID3AQ96N28 172 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 SIGLEC8Q9NYZ4 499 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 SOX21Q9Y651 276 aaPredicted RBP8.64□□□□□ -1.03
LINC00661-204ENST00000549354 A6NJY4 79 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 NDUFA3O95167 84 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 PRSS1P07477 247 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 HOXB4P17483 251 aaPredicted RBP8.64□□□□□ -1.03
LINC00661-204ENST00000549354 CDKN1BP46527 198 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 VMO1Q7Z5L0 202 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 ZNF843Q8N446 348 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 MEGF9Q9H1U4 602 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 TMEM189A5PLL7 270 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 PRAC2D3DTV9 90 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 EBI3Q14213 229 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 FAM162BQ5T6X4 162 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 BRD3OSQ6XYD6 125 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms