RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 RBMY1A1P0DJD3 496 aaKnown RBP12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 RBMY1CP0DJD4 496 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 FHITP49789 147 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 RBMY1FQ15415 496 aaKnown RBP12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 EIF5AL1Q6IS14 154 aaKnown RBP12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 CMTM2Q8TAZ6 248 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 VGLL1Q99990 258 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 C20orf144Q9BQM9 153 aa12.77□□□□□ -0.37
RAPGEF3-220ENST00000549347 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 A0A1W2PRE2 83 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 GGTLC3B5MD39 225 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 IQCF2Q8IXL9 164 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 FAM213BQ8TBF2 198 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 ZNF492Q9P255 531 aa12.76□□□□□ -0.37
RAPGEF3-220ENST00000549347 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 KLLNB2CW77 178 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 C3orf84H3BNL1 204 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 DEFB4AO15263 64 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 CRISP2P16562 243 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 KIR3DS1Q14943 382 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 GFI1BQ5VTD9 330 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 TMPRSS5Q9H3S3 457 aa12.75□□□□□ -0.37
RAPGEF3-220ENST00000549347 NMBP08949 121 aa12.74□□□□□ -0.37
RAPGEF3-220ENST00000549347 RAB5CP51148 216 aa12.74□□□□□ -0.37
RAPGEF3-220ENST00000549347 ZNF138P52744 262 aa12.74□□□□□ -0.37
RAPGEF3-220ENST00000549347 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
RAPGEF3-220ENST00000549347 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 HBE1P02100 147 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 GNG5P63218 68 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 ZFAND2AQ8N6M9 145 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 Q8TAT8 98 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
RAPGEF3-220ENST00000549347 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 FAM74A7A6NL05 159 aa12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 TCRAP04437 139 aa12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 SULT1A2P50226 295 aa12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 NKX2-5P52952 324 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
RAPGEF3-220ENST00000549347 LOC102723971A0A1B0GUV8 181 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 C7orf71A4D174 169 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 H7BYZ3 331 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 J3KRW8 73 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 UBE2G2P60604 165 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 SFT2D1Q8WV19 159 aa12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 NKX6-2Q9C056 277 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-220ENST00000549347 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 TAS2R60P59551 318 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 CASC10Q5T4H9 136 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 PRR9Q5T870 116 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 C11orf45Q8TAV5 145 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 STARD9Q9P2P6 4700 aa12.7□□□□□ -0.38
RAPGEF3-220ENST00000549347 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 LINC01587Q99440 93 aa12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 CELA1Q9UNI1 258 aa12.69□□□□□ -0.38
RAPGEF3-220ENST00000549347 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 K7EQM0 130 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 GPX1P07203 203 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 ZFAND6Q6FIF0 208 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 TMEM75Q8N9X5 138 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 TCEAL7Q9BRU2 100 aa12.68□□□□□ -0.38
RAPGEF3-220ENST00000549347 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 PRM2P04554 102 aa12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 CCDC28AQ8IWP9 274 aa12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
RAPGEF3-220ENST00000549347 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 A0A1B0GV50 99 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 CXorf65A6NEN9 183 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 PEX7O00628 323 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 IFNA7P01567 189 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 IGLV2-11P01706 119 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 AZU1P20160 251 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 PPT1P50897 306 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 PMS2P11Q13670 270 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 TMEM263Q8WUH6 116 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms