RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 LOC102723971A0A1B0GUV8 181 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 A0A1B0GV50 99 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 CXorf1O96002 111 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 OR10J1P30954 320 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 CCL20P78556 96 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
CDX2-202ENST00000548877 TMEM88Q6PEY1 159 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 TRGV9Q99603 122 aa9.55□□□□□ -0.88
CDX2-202ENST00000548877 MRPL32Q9BYC8 188 aaKnown RBP9.55□□□□□ -0.88
CDX2-202ENST00000548877 DMBT1Q9UGM3 2413 aaPredicted RBP9.55□□□□□ -0.88
CDX2-202ENST00000548877 ZFP92A6NM28 416 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 EMP1P54849 157 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 S100A7AQ86SG5 101 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 ZNRF2Q8NHG8 242 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 NPIPB3Q92617 1050 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 NRN1Q9NPD7 142 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
CDX2-202ENST00000548877 LINC00869P0C866 280 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 RND2P52198 227 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 FGF8P55075 233 aaPredicted RBP9.53□□□□□ -0.88
CDX2-202ENST00000548877 YPEL3P61236 119 aaPredicted RBP9.53□□□□□ -0.88
CDX2-202ENST00000548877 ICAM4Q14773 271 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 MLANAQ16655 118 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 NKX6-2Q9C056 277 aaPredicted RBP9.53□□□□□ -0.88
CDX2-202ENST00000548877 TMEM167BQ9NRX6 74 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 FUT9Q9Y231 359 aa9.53□□□□□ -0.88
CDX2-202ENST00000548877 TMEM250H0YL14 139 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 BUB3O43684 328 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 OR5G3P0C626 314 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 IGLC1P0CG04 106 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
CDX2-202ENST00000548877 TIGITQ495A1 244 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 IQCF2Q8IXL9 164 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 RXFP4Q8TDU9 374 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 DNAJC4Q9NNZ3 241 aa9.52□□□□□ -0.89
CDX2-202ENST00000548877 IGKV1OR2-108A0A075B7D4 117 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 PDE6DO43924 150 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 SRP19P09132 144 aaKnown RBP9.51□□□□□ -0.89
CDX2-202ENST00000548877 HTN3P15516 51 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 S100A7P31151 101 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 GDF5OSQ5U4N7 250 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 Q8WTZ3 238 aa9.51□□□□□ -0.89
CDX2-202ENST00000548877 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
CDX2-202ENST00000548877 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
CDX2-202ENST00000548877 C9JQL5 133 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 F6UZH7 168 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 RHEBQ15382 184 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
CDX2-202ENST00000548877 GCSAMLQ5JQS6 135 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 C1orf158Q8N1D5 194 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 ATG101Q9BSB4 218 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
CDX2-202ENST00000548877 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 BTF3P20290 206 aaKnown RBP9.49□□□□□ -0.89
CDX2-202ENST00000548877 GCHFRP30047 84 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 PLP1P60201 277 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 DAD1P61803 113 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
CDX2-202ENST00000548877 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 CLRN3Q8NCR9 226 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 GOLT1BQ9Y3E0 138 aa9.49□□□□□ -0.89
CDX2-202ENST00000548877 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 B4DEV8 164 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 HMGB3O15347 200 aaKnown RBP9.48□□□□□ -0.89
CDX2-202ENST00000548877 HYPMO75409 117 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 FXYD7P58549 80 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
CDX2-202ENST00000548877 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 A8MTW9 85 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 M0R036 132 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 SOCS3O14543 225 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 PAGE4O60829 102 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 TOMM40O96008 361 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 IL4P05112 153 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 RD3LP0DJH9 198 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 FAT1Q14517 4588 aa9.47□□□□□ -0.89
CDX2-202ENST00000548877 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 OR7C2O60412 319 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms