RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ELANEP08246 267 aa15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 MGST1P10620 155 aaKnown RBP15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 FAM3BP58499 235 aaPredicted RBP15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 SLC35B1P78383 322 aa15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 RPEL1Q2QD12 228 aa15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 ZFP30Q9Y2G7 519 aa15.09■□□□□ 0.01
CTDSP2-204ENST00000548823 DIRC3C9JPN6 131 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 IGLV2-11P01706 119 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 CSN1S1P47710 185 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 FOXE3Q13461 319 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 Q86TA4 180 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 TMEM183AQ8IXX5 376 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 KLHL30-AS1Q8NEE0 82 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 SLC50A1Q9BRV3 221 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 ZMAT4Q9H898 229 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 RPH3ALQ9UNE2 315 aa15.08■□□□□ 0
CTDSP2-204ENST00000548823 ZNF256Q9Y2P7 627 aaPredicted RBP15.08■□□□□ 0
CTDSP2-204ENST00000548823 RPL19P84098 196 aaKnown RBP15.07■□□□□ 0
CTDSP2-204ENST00000548823 C16orf54Q6UWD8 224 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 GOLT1AQ6ZVE7 132 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 ZFP82Q8N141 532 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 RNF152Q8N8N0 203 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 MYOZ3Q8TDC0 251 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 ZNF331Q9NQX6 463 aaPredicted RBP15.07■□□□□ 0
CTDSP2-204ENST00000548823 CLEC5AQ9NY25 188 aa15.07■□□□□ 0
CTDSP2-204ENST00000548823 PHOX2AO14813 284 aa15.06■□□□□ 0
CTDSP2-204ENST00000548823 PSG3Q16557 428 aa15.06■□□□□ 0
CTDSP2-204ENST00000548823 RNASE7Q9H1E1 156 aaKnown RBP15.06■□□□□ 0
CTDSP2-204ENST00000548823 PEF1Q9UBV8 284 aaKnown RBP15.06■□□□□ 0
CTDSP2-204ENST00000548823 ZNF320A2RRD8 509 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 ZNF785A8K8V0 405 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 K7EMT4 169 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 GATCO43716 136 aaKnown RBP15.05■□□□□ -0
CTDSP2-204ENST00000548823 TRBV12-3P01733 135 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 TRGC2P03986 189 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 NUDT10Q8NFP7 164 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 MRPL53Q96EL3 112 aaKnown RBP15.05■□□□□ -0
CTDSP2-204ENST00000548823 NUDT11Q96G61 164 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 DUX3Q96PT4 197 aa15.05■□□□□ -0
CTDSP2-204ENST00000548823 SMIM27A0A1W2PRY6 76 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 A0A1W2PS18 150 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 C19orf71A6NCJ1 209 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 CCL24O00175 119 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 IGHV3-11P01762 117 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 CT83Q5H943 113 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 GPHB5Q86YW7 130 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 GLMPQ8WWB7 406 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 GRAMD2BQ96HH9 432 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 RAX2Q96IS3 184 aa15.04■□□□□ -0
CTDSP2-204ENST00000548823 SORL1Q92673 2214 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 IGHV3OR16-8A0A075B7F1 116 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 C5orf52A6NGY3 159 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 S100A6P06703 90 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 COX19Q49B96 90 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 COX8CQ7Z4L0 72 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 NHLRC2Q8NBF2 726 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 PSG8Q9UQ74 426 aa15.03■□□□□ -0
CTDSP2-204ENST00000548823 HERC2O95714 4834 aa15.02■□□□□ -0
CTDSP2-204ENST00000548823 ZNF705GA8MUZ8 300 aaPredicted RBP15.02■□□□□ -0
CTDSP2-204ENST00000548823 M0R3E3 92 aa15.02■□□□□ -0
CTDSP2-204ENST00000548823 PCLOQ9Y6V0 5065 aa15.02■□□□□ -0
CTDSP2-204ENST00000548823 RBAKDNA6NC62 111 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 APOHP02749 345 aaPredicted RBP15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 FAM106AQ4KMX7 169 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 ACTL10Q5JWF8 245 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 UNQ9165/PRO28630Q6UXU0 137 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 PRNTQ86SH4 94 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 OR4B1Q8NGF8 309 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 UBE2E2Q96LR5 201 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 EDA2RQ9HAV5 297 aa15.01□□□□□ -0.01
CTDSP2-204ENST00000548823 NPIPB6E9PJ23 425 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BKO60814 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BJP06899 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BOP23527 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BBP33778 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BDP58876 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BCP62807 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST2H2BEQ16778 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST2H2BFQ5QNW6 126 aaPredicted RBP15□□□□□ -0.01
CTDSP2-204ENST00000548823 FRZBQ92765 325 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BHQ93079 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 SGK494Q96LW2 274 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BNQ99877 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 HIST1H2BMQ99879 126 aa15□□□□□ -0.01
CTDSP2-204ENST00000548823 TRAV8-1A0A0A6YYK1 113 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 UBE2CO00762 179 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 CHEK1O14757 476 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 ZNF207O43670 478 aaKnown RBP14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 FRMD6-AS1P0C7T7 363 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 SAPCD1Q5SSQ6 148 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 LCN12Q6JVE5 192 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 LCNL1Q6ZST4 164 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 TSKUQ8WUA8 353 aa14.99□□□□□ -0.01
CTDSP2-204ENST00000548823 IGHV7-4-1A0A0J9YVY3 117 aa14.98□□□□□ -0.01
CTDSP2-204ENST00000548823 FAM231BA6NCW3 169 aa14.98□□□□□ -0.01
CTDSP2-204ENST00000548823 IZUMO1RA6ND01 250 aa14.98□□□□□ -0.01
CTDSP2-204ENST00000548823 RBMY1BA6NDE4 496 aaKnown RBP14.98□□□□□ -0.01
CTDSP2-204ENST00000548823 RBMY1EA6NEQ0 496 aaKnown RBP14.98□□□□□ -0.01
CTDSP2-204ENST00000548823 LGALS1P09382 135 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms