RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 J3QLW9 94 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 M0R036 132 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 SLC22A1O15245 554 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 GYG2O15488 501 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 HBZP02008 142 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 IFNA4P05014 189 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CGB3P0DN86 165 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CGB7P0DN87 165 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 GTF2F2P13984 249 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 RCVRNP35243 200 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF93P35789 620 aaPredicted RBP2.12□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF137PP52743 207 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 BTN1A1Q13410 526 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CDK5R1Q15078 307 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 MPV17LQ2QL34 196 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 PIGYQ3MUY2 71 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 UBE2NLQ5JXB2 153 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 LPCAT4Q643R3 524 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 GLT8D1Q68CQ7 371 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CD200R1LQ6Q8B3 271 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 SPINT4Q6UDR6 99 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 DEFB125Q8N687 156 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 OR51A2Q8NGJ7 313 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 OR10K1Q8NGX5 313 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 GRPEL2Q8TAA5 225 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 GALMQ96C23 342 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 USMG5Q96IX5 58 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 PACRGQ96M98 296 aaPredicted RBP2.12□□□□□ -2.07
PTCH1-216ENST00000548379 PHB2Q99623 299 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 TMEM208Q9BTX3 173 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 MS4A6AQ9H2W1 248 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 FBXL15Q9H469 300 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 SND1-IT1Q9HBX3 110 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 METTL1Q9UBP6 276 aaKnown RBP2.12□□□□□ -2.07
PTCH1-216ENST00000548379 CKLFQ9UBR5 152 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 JPT1Q9UK76 154 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 WNK1Q9H4A3 2382 aa2.12□□□□□ -2.07
PTCH1-216ENST00000548379 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TRAV8-3A0A0A6YYJ7 113 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 G3V2T6 193 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 C15orf65H3BRN8 121 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 GEMIN2O14893 280 aaKnown RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 CREBL2O60519 120 aaPredicted RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 YPEL1O60688 119 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 NDUFA3O95167 84 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 APOA2P02652 100 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TYMSP04818 313 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 RBM11P57052 281 aaKnown RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TCTAP57738 103 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 ATP5G2Q06055 141 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 FXYD3Q14802 87 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 SSX1Q16384 188 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 MORN2Q502X0 79 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 C12orf73Q69YU5 71 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 LGALS9CQ6DKI2 356 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 HS3ST5Q8IZT8 346 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 RPP25LQ8N5L8 163 aaKnown RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 GATD1Q8NB37 220 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 OR4K15Q8NH41 348 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 OR5AK2Q8NH90 309 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 CANT1Q8WVQ1 401 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TMEM106AQ96A25 262 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 YPEL2Q96QA6 119 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 LINC01587Q99440 93 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 NABP2Q9BQ15 211 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 FAM103A1Q9BTL3 118 aaKnown RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 MRPS26Q9BYN8 205 aaKnown RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 C6orf62Q9GZU0 229 aaPredicted RBP2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TAF9BQ9HBM6 251 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 TMEM138Q9NPI0 162 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 COA4Q9NYJ1 87 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 ARL2BPQ9Y2Y0 163 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 WASHC3Q9Y3C0 194 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 NUBP2Q9Y5Y2 271 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 CMYA5Q8N3K9 4069 aa2.11□□□□□ -2.07
PTCH1-216ENST00000548379 YLPM1P49750 1951 aaKnown RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 FAM223BA6NKX1 122 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 C9JQL5 133 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 M0R129 80 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 COX7A2P2O60397 106 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 DEDDO75618 318 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 DHFRP00374 187 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 CD7P09564 240 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 CTXN2P0C2S0 81 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 SAA2P0DJI9 122 aaPredicted RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 PPP1CCP36873 323 aaKnown RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 CBX5P45973 191 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 DAPP51397 102 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 AP2S1P53680 142 aaPredicted RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 TNFRSF9Q07011 255 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 SMAGPQ0VAQ4 97 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF773Q6PK81 442 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 FAM131AQ6UXB0 335 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 LINC00322Q6ZN03 302 aaPredicted RBP2.1□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF833PQ6ZTB9 187 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 LYG2Q86SG7 212 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 PDPNQ86YL7 162 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 FAM223AQ8IWN6 122 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms