RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF138P52744 262 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 ZNF674Q2M3X9 581 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 SMIM12Q96EX1 92 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 CLUHP3Q96NS8 147 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 VGLL1Q99990 258 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 PSG8Q9UQ74 426 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 KRBOX1C9JBD0 128 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 F6UB75 175 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 GNG4P50150 75 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 STHQ8IWL8 128 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 ODF3Q96PU9 254 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 NIPSNAP3BQ9BS92 247 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 C19orf73Q9NVV2 129 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 ZNF492Q9P255 531 aa11.75□□□□□ -0.53
TRAFD1-203ENST00000547063 TRAV8-1A0A0A6YYK1 113 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 F8W036 122 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 H3BMM0 161 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 LTAP01374 205 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 TSPOP30536 169 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 ERCC8Q13216 396 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 PRNTQ86SH4 94 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 Q86TA4 180 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 SEC11CQ9BY50 192 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 BIN3Q9NQY0 253 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
TRAFD1-203ENST00000547063 A8MTW9 85 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 G3V4G9 280 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 ZNF705DP0CH99 300 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 ZNF705BP0CI00 300 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 CENPWQ5EE01 88 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 PRR25Q96S07 402 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
TRAFD1-203ENST00000547063 LEPP41159 167 aa11.72□□□□□ -0.53
TRAFD1-203ENST00000547063 DEFB1P60022 68 aa11.72□□□□□ -0.53
TRAFD1-203ENST00000547063 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
TRAFD1-203ENST00000547063 SGK494Q96LW2 274 aa11.72□□□□□ -0.53
TRAFD1-203ENST00000547063 IGF2BP2-AS1Q96M15 143 aa11.72□□□□□ -0.53
TRAFD1-203ENST00000547063 AMBPP02760 352 aa11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 CT45A10P0DMU9 189 aa11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 KRTAP10-11P60412 298 aa11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 Q8TAT8 98 aa11.71□□□□□ -0.53
TRAFD1-203ENST00000547063 TRBV20OR9-2A0A075B6H5 130 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 CRISP2P16562 243 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 ZNF124Q15973 351 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 SMUG1Q53HV7 270 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 KPRPQ5T749 579 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 COX8CQ7Z4L0 72 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 Q8N1Y9 231 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 DEFB125Q8N687 156 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 FAM19A4Q96LR4 140 aa11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-203ENST00000547063 IGKV3-20P01619 116 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 CDKN1BP46527 198 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 AMTNQ6UX39 209 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 SRD5A3Q9H8P0 318 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
TRAFD1-203ENST00000547063 GPX1P07203 203 aa11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 MGST1P10620 155 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 ADCYAP1P18509 176 aa11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 OCC1Q8TAD7 63 aa11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 C1QTNF4Q9BXJ3 329 aa11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
TRAFD1-203ENST00000547063 AGRNO00468 2067 aa11.67□□□□□ -0.54
TRAFD1-203ENST00000547063 LINC01551Q86U37 167 aa11.67□□□□□ -0.54
TRAFD1-203ENST00000547063 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
TRAFD1-203ENST00000547063 ASCL2Q99929 193 aa11.67□□□□□ -0.54
TRAFD1-203ENST00000547063 A8MZ25 164 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 KLLNB2CW77 178 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 RPL23P62829 140 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 ADIRFQ15847 76 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 NHLRC2Q8NBF2 726 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
TRAFD1-203ENST00000547063 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 KIR2DL5BA0A0G2JN68 375 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 KIR2DL5BA0A0G2JPC4 375 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 B4DEV8 164 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 GCGP01275 180 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms