RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 IGKV3-20P01619 116 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 EDN2P20800 178 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 PIFOQ8TCI5 191 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 MLST8Q9BVC4 326 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 BEX4Q9NWD9 120 aaPredicted RBP9.85□□□□□ -0.83
SCAF11-209ENST00000547018 A0A1W2PS18 150 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 ZNF843Q8N446 348 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 C11orf44Q8N8P7 122 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 C18orf32Q8TCD1 76 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 METTL26Q96S19 204 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 DDTP30046 118 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 EBI3Q14213 229 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 DEFB112Q30KQ8 113 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 SRSF8Q9BRL6 282 aaKnown RBP9.84□□□□□ -0.83
SCAF11-209ENST00000547018 KLF12Q9Y4X4 402 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 ZNF469Q96JG9 3925 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-209ENST00000547018 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 RBPMS2Q6ZRY4 209 aaKnown RBP9.84□□□□□ -0.83
SCAF11-209ENST00000547018 BORCS7Q96B45 105 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 MBD6Q96DN6 1003 aa9.84□□□□□ -0.83
SCAF11-209ENST00000547018 B4DSR2 109 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 F6UB75 175 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 MT-ND6P03923 174 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 ZNF80P51504 273 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-209ENST00000547018 TMEM14CQ9P0S9 112 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 SH2D1AO60880 128 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
SCAF11-209ENST00000547018 NCR2O95944 276 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 TWIST1Q15672 202 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 LYZL1Q6UWQ5 148 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
SCAF11-209ENST00000547018 S100A7AQ86SG5 101 aa9.82□□□□□ -0.84
SCAF11-209ENST00000547018 GPX1P07203 203 aa9.82□□□□□ -0.84
SCAF11-209ENST00000547018 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
SCAF11-209ENST00000547018 UNC79Q9P2D8 2635 aa9.82□□□□□ -0.84
SCAF11-209ENST00000547018 BUB3O43684 328 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 IGF1P05019 195 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 PKIAP61925 76 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 SRSF1Q07955 248 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCAF11-209ENST00000547018 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 NIT1Q86X76 327 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 ZNF738Q8NE65 137 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 POLR3KQ9Y2Y1 108 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-209ENST00000547018 A0A1B0GUT8 65 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
SCAF11-209ENST00000547018 FAM231DQ6ZW35 169 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 RNF24Q9Y225 148 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 C19orf71A6NCJ1 209 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
SCAF11-209ENST00000547018 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-209ENST00000547018 TRAV9-1A0A075B6T8 112 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.8□□□□□ -0.84
SCAF11-209ENST00000547018 ZNF324O75467 553 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-209ENST00000547018 PSG9Q00887 426 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 PRR25Q96S07 402 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 TRBV9A0A0B4J1U6 114 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 KCNS1Q96KK3 526 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-209ENST00000547018 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
SCAF11-209ENST00000547018 NDFIP1Q9BT67 221 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 UFC1Q9Y3C8 167 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 FAM162BQ5T6X4 162 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 PRSS22Q9GZN4 317 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 ZFP30Q9Y2G7 519 aa9.79□□□□□ -0.84
SCAF11-209ENST00000547018 PAFAH1B2P68402 229 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 Q96MF0 132 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 HIST1H1AQ02539 215 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-209ENST00000547018 Q5PR19 223 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 TMEM78Q5T7P6 136 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 A8MWP6 167 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 IGHG4P01861 327 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 EVI2AP22794 236 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 FOXE3Q13461 319 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 DEFB136Q30KP8 78 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.78□□□□□ -0.84
SCAF11-209ENST00000547018 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 HTN1P15515 57 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 Q0VG73 95 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 RIGQ13278 110 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 NDUFS8O00217 210 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
SCAF11-209ENST00000547018 D6R8Y8 96 aa9.76□□□□□ -0.85
SCAF11-209ENST00000547018 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
SCAF11-209ENST00000547018 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms