RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 J3KRW8 73 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 SLC25A5P05141 298 aaKnown RBP10.48□□□□□ -0.73
CCDC38-205ENST00000546947 UBE2L3P68036 154 aaKnown RBP10.48□□□□□ -0.73
CCDC38-205ENST00000546947 TMEM78Q5T7P6 136 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 CCDC28AQ8IWP9 274 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
CCDC38-205ENST00000546947 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 C7orf71A4D174 169 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 KLLNB2CW77 178 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 NMBP08949 121 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 P0DMU3 169 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 HTN3P15516 51 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 CRISP2P16562 243 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 CSN1S1P47710 185 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 Q5BKY6 102 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 PSMG3Q9BT73 122 aaPredicted RBP10.47□□□□□ -0.73
CCDC38-205ENST00000546947 Q9H3A6 140 aa10.47□□□□□ -0.73
CCDC38-205ENST00000546947 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
CCDC38-205ENST00000546947 RBAKDNA6NC62 111 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
CCDC38-205ENST00000546947 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
CCDC38-205ENST00000546947 INO80EQ8NBZ0 244 aaPredicted RBP10.46□□□□□ -0.73
CCDC38-205ENST00000546947 OR10G4Q8NGN3 311 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 ZNF492Q9P255 531 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
CCDC38-205ENST00000546947 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.74
CCDC38-205ENST00000546947 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 DEFB130BP0DP73 79 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 DEFB130AP0DP74 79 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 RAB2AP61019 212 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 SERF2P84101 59 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 HSD17B11Q8NBQ5 300 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 VGLL1Q99990 258 aa10.45□□□□□ -0.74
CCDC38-205ENST00000546947 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
CCDC38-205ENST00000546947 FXYD6-FXYD2A0A087WZ82 144 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 CBY3A6NI87 242 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 SNURFLB1AK76 121 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 ZNF324O75467 553 aaPredicted RBP10.44□□□□□ -0.74
CCDC38-205ENST00000546947 MBP02144 154 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 ATP5G1P05496 136 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 GPX1P07203 203 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 ATP6V0CP27449 155 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 ATP5G3P48201 142 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
CCDC38-205ENST00000546947 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 FAM74A1Q5RGS3 127 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 OR2T35Q8NGX2 323 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 RXFP4Q8TDU9 374 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 LINC00467Q9BRT7 94 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 TNFSF18Q9UNG2 199 aa10.44□□□□□ -0.74
CCDC38-205ENST00000546947 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 LCE2BO14633 110 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 EIF3GO75821 320 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC38-205ENST00000546947 ZNF138P52744 262 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 CD300CQ08708 224 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 TMEM88Q6PEY1 159 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 ZFAND2AQ8N6M9 145 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 OTORQ9NRC9 128 aa10.43□□□□□ -0.74
CCDC38-205ENST00000546947 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 PGPA6NDG6 321 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
CCDC38-205ENST00000546947 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 EIF4E3Q8N5X7 224 aaKnown RBP10.42□□□□□ -0.74
CCDC38-205ENST00000546947 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 LINC00612Q8N6U2 182 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 ZNF680Q8NEM1 530 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 CMTM2Q8TAZ6 248 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 GNPNAT1Q96EK6 184 aaPredicted RBP10.42□□□□□ -0.74
CCDC38-205ENST00000546947 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
CCDC38-205ENST00000546947 F5H768 121 aa10.41□□□□□ -0.74
CCDC38-205ENST00000546947 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
CCDC38-205ENST00000546947 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
CCDC38-205ENST00000546947 TMED6Q8WW62 240 aa10.41□□□□□ -0.74
CCDC38-205ENST00000546947 G3V3Q6 166 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
CCDC38-205ENST00000546947 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 PRR9Q5T870 116 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 RPL7L1Q6DKI1 246 aaKnown RBP10.4□□□□□ -0.74
CCDC38-205ENST00000546947 Q8TAT8 98 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 RAB24Q969Q5 203 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
CCDC38-205ENST00000546947 TAAR5O14804 337 aa10.39□□□□□ -0.75
CCDC38-205ENST00000546947 RGS13O14921 159 aa10.39□□□□□ -0.75
CCDC38-205ENST00000546947 RNF212Q495C1 297 aa10.39□□□□□ -0.75
CCDC38-205ENST00000546947 IBA57Q5T440 356 aaKnown RBP10.39□□□□□ -0.75
CCDC38-205ENST00000546947 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms