RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 LYZP61626 148 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 EIF5AP63241 154 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 C1orf194Q5T5A4 169 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 OR1L4Q8NGR5 311 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 PFDN5Q99471 154 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 RNF222A6NCQ9 220 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 G3V3Q6 166 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 OPCMLQ14982 345 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 PPP1R14BQ96C90 147 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 GPR82Q96P67 336 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 MGST2Q99735 147 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 NPCDR1Q9BY65 106 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 TIMM9Q9Y5J7 89 aa10.4□□□□□ -0.74
CLSTN3-216ENST00000545663 A0A0J9YX75 114 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 CRXO43186 299 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 BUB3O43684 328 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 TSPOP30536 169 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 B2MP61769 119 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 SAMD13Q5VXD3 122 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 SLC39A9Q9NUM3 307 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
CLSTN3-216ENST00000545663 M0R2Z0 102 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 ORM2P19652 201 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 ZFP69Q49AA0 526 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 OR1B1Q8NGR6 318 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 ARPC5LQ9BPX5 153 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 DNAJC4Q9NNZ3 241 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 PXMP4Q9Y6I8 212 aa10.38□□□□□ -0.75
CLSTN3-216ENST00000545663 SMLR1H3BR10 107 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 PFDN1O60925 122 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 NXPH4O95158 308 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 MBP02144 154 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 OR5G3P0C626 314 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 MEOX2P50222 304 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 SERF2P84101 59 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 EBLN2Q6P2I7 272 aa10.37□□□□□ -0.75
CLSTN3-216ENST00000545663 A0A096LPF7 62 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 A0A1B0GVG6 124 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 SOCS3O14543 225 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 HTN1P15515 57 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 GATA2P23769 480 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 MIC13Q5XKP0 118 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 BAP18Q8IXM2 172 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 ARV1Q9H2C2 271 aa10.36□□□□□ -0.75
CLSTN3-216ENST00000545663 INSP01308 110 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 ID1P41134 155 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 GALR1P47211 349 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 PSMB3P49720 205 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 ACOT6Q3I5F7 207 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 OR2G3Q8NGZ4 309 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 SHANK2-AS3Q9BTD1 123 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 MRPL32Q9BYC8 188 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-216ENST00000545663 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 ZNF98A6NK75 572 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 BCL2L11O43521 198 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 TMEM182Q6ZP80 229 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 DOK5Q9P104 306 aa10.34□□□□□ -0.75
CLSTN3-216ENST00000545663 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 A8MTW9 85 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 H3BRN7 92 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 TAS2R45P59539 299 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 Q6ZSA8 131 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 BPIFA4PQ86YQ2 179 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 HSD17B11Q8NBQ5 300 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 LINC01587Q99440 93 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
CLSTN3-216ENST00000545663 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 H3BNG1 76 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 CXCL2P19875 107 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 ATP6V0CP27449 155 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 RHOBP62745 196 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms