RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ZANQ9Y493 2812 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 DOPEY2Q9Y3R5 2298 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 HAX1O00165 279 aa12.71□□□□□ -0.37
CHFR-224ENST00000545046 FAM106AQ4KMX7 169 aa12.71□□□□□ -0.37
CHFR-224ENST00000545046 DNLZQ5SXM8 178 aa12.71□□□□□ -0.37
CHFR-224ENST00000545046 Q6AWC8 147 aa12.71□□□□□ -0.37
CHFR-224ENST00000545046 JOSD1Q15040 202 aaPredicted RBP12.71□□□□□ -0.37
CHFR-224ENST00000545046 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 F2Z2F3 143 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 CTAG1AP78358 180 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 RIGQ13278 110 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 BORCS7Q96B45 105 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 TENM4Q6N022 2769 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 LINC00310P59036 64 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 TMEM78Q5T7P6 136 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
CHFR-224ENST00000545046 DAZ1Q9NQZ3 744 aaKnown RBP12.7□□□□□ -0.38
CHFR-224ENST00000545046 RPS20P60866 119 aaKnown RBP12.69□□□□□ -0.38
CHFR-224ENST00000545046 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 GSN-AS1Q9NRJ2 163 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 FABP5P3A8MUU1 101 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 K7EMT4 169 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 TM4SF20Q53R12 229 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
CHFR-224ENST00000545046 TMSB15BA0A087X1C1 80 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 A0A1B0GW15 77 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
CHFR-224ENST00000545046 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
CHFR-224ENST00000545046 FOXE3Q13461 319 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 C18orf32Q8TCD1 76 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 ALKBH7Q9BT30 221 aaPredicted RBP12.68□□□□□ -0.38
CHFR-224ENST00000545046 TPPP3Q9BW30 176 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 RHPN1-AS1Q9BWJ2 59 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 AGPAT4-IT1Q9H0P7 198 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 TEX15Q9BXT5 2789 aa12.68□□□□□ -0.38
CHFR-224ENST00000545046 RPLP1P05386 114 aaKnown RBP12.67□□□□□ -0.38
CHFR-224ENST00000545046 ELANEP08246 267 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 ZNF138P52744 262 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
CHFR-224ENST00000545046 CDPF1Q6NVV7 123 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 KLF5Q13887 457 aaPredicted RBP12.67□□□□□ -0.38
CHFR-224ENST00000545046 C9orf47Q6ZRZ4 202 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 KCNS1Q96KK3 526 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 UFC1Q9Y3C8 167 aa12.67□□□□□ -0.38
CHFR-224ENST00000545046 RCHY1Q96PM5 261 aa12.66□□□□□ -0.38
CHFR-224ENST00000545046 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
CHFR-224ENST00000545046 ORM1P02763 201 aa12.66□□□□□ -0.38
CHFR-224ENST00000545046 LYZL1Q6UWQ5 148 aa12.66□□□□□ -0.38
CHFR-224ENST00000545046 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CHFR-224ENST00000545046 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
CHFR-224ENST00000545046 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
CHFR-224ENST00000545046 CREBBPQ92793 2442 aa12.65□□□□□ -0.39
CHFR-224ENST00000545046 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
CHFR-224ENST00000545046 SOCS3O14543 225 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 OVOL1O14753 267 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 GPX1P07203 203 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 LGALS1P09382 135 aaKnown RBP12.64□□□□□ -0.39
CHFR-224ENST00000545046 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
CHFR-224ENST00000545046 SCGB1D1O95968 90 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
CHFR-224ENST00000545046 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 MXRA5Q9NR99 2828 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 TMEM86BQ8N661 226 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
CHFR-224ENST00000545046 IGKV3-7A0A075B6H7 116 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
CHFR-224ENST00000545046 AMTP48728 403 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 Q8N2B8 174 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 PMCHP20382 165 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 RNF152Q8N8N0 203 aa12.62□□□□□ -0.39
CHFR-224ENST00000545046 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
CHFR-224ENST00000545046 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
CHFR-224ENST00000545046 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
CHFR-224ENST00000545046 Q6ZWC4 215 aa12.61□□□□□ -0.39
CHFR-224ENST00000545046 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 CTRLP40313 264 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 ID1P41134 155 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 FOXC2Q99958 501 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 HSBP1O75506 76 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 SSTP61278 116 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 RNASEKQ6P5S7 137 aaKnown RBP12.6□□□□□ -0.39
CHFR-224ENST00000545046 NIT1Q86X76 327 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms