RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
ACTN1-206ENST00000544964 IGKV2-40A0A087WW87 121 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-206ENST00000544964 DUSP14O95147 198 aaKnown RBP9.06□□□□□ -0.96
ACTN1-206ENST00000544964 IGKV2D-40P01614 121 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-206ENST00000544964 SUMO1P63165 101 aaKnown RBP9.06□□□□□ -0.96
ACTN1-206ENST00000544964 GNG5P63218 68 aa9.06□□□□□ -0.96
ACTN1-206ENST00000544964 ERCC8Q13216 396 aa9.06□□□□□ -0.96
ACTN1-206ENST00000544964 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
ACTN1-206ENST00000544964 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 GGTLC3B5MD39 225 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-206ENST00000544964 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
ACTN1-206ENST00000544964 CSN1S1P47710 185 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 TEX261Q6UWH6 196 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 CMTM2Q8TAZ6 248 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 CSTL1Q9H114 145 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 SLC35B3Q9H1N7 401 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
ACTN1-206ENST00000544964 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-206ENST00000544964 DNAH6Q9C0G6 4158 aa9.05□□□□□ -0.96
ACTN1-206ENST00000544964 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 A0A1W2PRE2 83 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 NPIPB6E9PJ23 425 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 PAGE4O60829 102 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 HBE1P02100 147 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-206ENST00000544964 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 MORN3Q6PF18 240 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-206ENST00000544964 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 ZNF680Q8NEM1 530 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 RXFP4Q8TDU9 374 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-206ENST00000544964 PCNPQ8WW12 178 aaKnown RBP9.04□□□□□ -0.96
ACTN1-206ENST00000544964 VGLL1Q99990 258 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
ACTN1-206ENST00000544964 PPP1R14DQ9NXH3 145 aa9.04□□□□□ -0.96
ACTN1-206ENST00000544964 A8MTW9 85 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 ATP5G3P48201 142 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 GNG13Q9P2W3 67 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 XCL2Q9UBD3 114 aa9.03□□□□□ -0.96
ACTN1-206ENST00000544964 M0R2Z0 102 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 IFNA7P01567 189 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 NANOS2P60321 138 aaKnown RBP9.02□□□□□ -0.97
ACTN1-206ENST00000544964 NUTF2P61970 127 aaKnown RBP9.02□□□□□ -0.97
ACTN1-206ENST00000544964 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 SGK494Q96LW2 274 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 RARRES2Q99969 163 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 EPDR1Q9UM22 224 aa9.02□□□□□ -0.97
ACTN1-206ENST00000544964 TRAV12-2A0A075B6T6 113 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 J3KRW8 73 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 TCRAP04437 139 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 PPT1P50897 306 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 TMEM78Q5T7P6 136 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 LGALS9CQ6DKI2 356 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 CCDC28AQ8IWP9 274 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 OR11H2Q8NH07 326 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 Q8TAT8 98 aa9.01□□□□□ -0.97
ACTN1-206ENST00000544964 NKX6-2Q9C056 277 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-206ENST00000544964 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 RBAKDNA6NC62 111 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 KIR3DS1Q14943 382 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 ARL6IP6Q8N6S5 226 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 LINC00477Q96M19 166 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 KRTAP17-1Q9BYP8 105 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 MANBALQ9NQG1 85 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 ZNF492Q9P255 531 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
ACTN1-206ENST00000544964 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 PEX7O00628 323 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 DEFB4AO15263 64 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-206ENST00000544964 IFNA1P01562 189 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 LEPP41159 167 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 ZNF138P52744 262 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 Q8NAQ8 132 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 C11orf45Q8TAV5 145 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 LINC00479Q96M42 142 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 ATG101Q9BSB4 218 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 C1QTNF4Q9BXJ3 329 aa8.99□□□□□ -0.97
ACTN1-206ENST00000544964 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 K7EQM0 130 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 AMBPP02760 352 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 BCL2P10415 239 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 TSPOP30536 169 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 CDKN1BP46527 198 aa8.98□□□□□ -0.97
ACTN1-206ENST00000544964 IFITM2Q01629 132 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms