RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 LINC00477Q96M19 166 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 LYSTQ99698 3801 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 NIPSNAP3BQ9BS92 247 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 NDFIP1Q9BT67 221 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 BIN3Q9NQY0 253 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 RPH3ALQ9UNE2 315 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 ZFP30Q9Y2G7 519 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 LENEPQ9Y5L5 61 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 LY96Q9Y6Y9 160 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 TRBV7-9A0A0J9YWB2 115 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 C9JQL5 133 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 C3orf84H3BNL1 204 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 RPL35P42766 123 aaKnown RBP7.1□□□□□ -1.27
YBX3-215ENST00000544504 GNG4P50150 75 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 GNG5P63218 68 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 FLI1Q01543 452 aaPredicted RBP7.1□□□□□ -1.27
YBX3-215ENST00000544504 TMEM241Q24JQ0 296 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 ZNF674Q2M3X9 581 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 GTSCR1Q86UQ5 136 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 B9D2Q9BPU9 175 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 NAT8Q9UHE5 227 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 ZNF256Q9Y2P7 627 aaPredicted RBP7.1□□□□□ -1.27
YBX3-215ENST00000544504 DNAH7Q8WXX0 4024 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 NOTCH3Q9UM47 2321 aa7.1□□□□□ -1.27
YBX3-215ENST00000544504 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 HLA-DMBP28068 263 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 ZNF138P52744 262 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 DEFB131AP59861 70 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 C20orf173Q96LM9 149 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 CLUHP3Q96NS8 147 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 PSG8Q9UQ74 426 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 CARHSP1Q9Y2V2 147 aaKnown RBP7.09□□□□□ -1.27
YBX3-215ENST00000544504 SELENOKQ9Y6D0 94 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
YBX3-215ENST00000544504 IGKV2-40A0A087WW87 121 aaPredicted RBP7.08□□□□□ -1.28
YBX3-215ENST00000544504 A0A0J9YX75 114 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
YBX3-215ENST00000544504 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 LTAP01374 205 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 IGKV2D-40P01614 121 aaPredicted RBP7.08□□□□□ -1.28
YBX3-215ENST00000544504 IGLL1P15814 213 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 TSPOP30536 169 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
YBX3-215ENST00000544504 CENPWQ5EE01 88 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 C10orf91Q5T1B1 145 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 PRNTQ86SH4 94 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 Q86TA4 180 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 SVBPQ8N300 66 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 TVP23CQ96ET8 276 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
YBX3-215ENST00000544504 SAV1Q9H4B6 383 aaPredicted RBP7.08□□□□□ -1.28
YBX3-215ENST00000544504 TRAV34A0A0B4J273 112 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 B4DEV8 164 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 ATP6V1G1O75348 118 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 SNAPINO95295 136 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 AMBPP02760 352 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 CT45A10P0DMU9 189 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 HLA-DRB4P13762 266 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 TMEM183AQ8IXX5 376 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 FAM24BQ8N5W8 94 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 DERL1Q9BUN8 251 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 ZNF492Q9P255 531 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
YBX3-215ENST00000544504 HERC2O95714 4834 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 IGLV2-11P01706 119 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 APOC3P02656 99 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 NHLRC4P0CG21 123 aaPredicted RBP7.06□□□□□ -1.28
YBX3-215ENST00000544504 LEPP41159 167 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 NUTF2P61970 127 aaKnown RBP7.06□□□□□ -1.28
YBX3-215ENST00000544504 ODF3L2Q3SX64 289 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 SMUG1Q53HV7 270 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 STHQ8IWL8 128 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 LINC00479Q96M42 142 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 PRR25Q96S07 402 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 VGLL1Q99990 258 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 AGPAT4-IT1Q9H0P7 198 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 SDF2L1Q9HCN8 221 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 U3KQK5 164 aa7.06□□□□□ -1.28
YBX3-215ENST00000544504 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 TRBV20OR9-2A0A075B6H5 130 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 A8MTW9 85 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 H3BMM0 161 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 M0R036 132 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 PPP1R2P9O14990 202 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
YBX3-215ENST00000544504 CRISP2P16562 243 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms