RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SNRPD3P62318 126 aaKnown RBP22.82■■□□□ 1.24
CCM2-219ENST00000544363 CD300EQ496F6 205 aaPredicted RBP22.82■■□□□ 1.24
CCM2-219ENST00000544363 C9orf47Q6ZRZ4 202 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 OR10G8Q8NGN5 311 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 ASCL2Q99929 193 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 TUBA4BQ9H853 241 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 H7BYZ3 331 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 AGPAT4-IT1Q9H0P7 198 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 BIN3Q9NQY0 253 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 TRAV25A0A0B4J276 109 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 ZNF688P0C7X2 276 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 SAPCD1Q5SSQ6 148 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 LINC00482Q8N8I6 264 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 PRR25Q96S07 402 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 OSTCQ9NRP0 149 aa22.81■■□□□ 1.24
CCM2-219ENST00000544363 CXorf65A6NEN9 183 aa22.8■■□□□ 1.24
CCM2-219ENST00000544363 TMEM78Q5T7P6 136 aa22.8■■□□□ 1.24
CCM2-219ENST00000544363 Q8TAT8 98 aa22.8■■□□□ 1.24
CCM2-219ENST00000544363 RNASE7Q9H1E1 156 aaKnown RBP22.8■■□□□ 1.24
CCM2-219ENST00000544363 PRR27Q6MZM9 219 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 C15orf54Q8N8G6 183 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 OR10J6PQ8NGY7 276 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 SAP30O75446 220 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 PSMG4Q5JS54 123 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 IBA57Q5T440 356 aaKnown RBP22.79■■□□□ 1.24
CCM2-219ENST00000544363 FAM231DQ6ZW35 169 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 OR8A1Q8NGG7 326 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 C8orf49Q96NF6 230 aa22.79■■□□□ 1.24
CCM2-219ENST00000544363 ZNF705DP0CH99 300 aaPredicted RBP22.78■■□□□ 1.24
CCM2-219ENST00000544363 ZNF705BP0CI00 300 aaPredicted RBP22.78■■□□□ 1.24
CCM2-219ENST00000544363 ZNF138P52744 262 aa22.78■■□□□ 1.24
CCM2-219ENST00000544363 DEFB1P60022 68 aa22.78■■□□□ 1.24
CCM2-219ENST00000544363 ZC2HC1AQ96GY0 325 aa22.78■■□□□ 1.24
CCM2-219ENST00000544363 NDFIP1Q9BT67 221 aa22.78■■□□□ 1.24
CCM2-219ENST00000544363 PPP1R14DQ9NXH3 145 aa22.78■■□□□ 1.24
CCM2-219ENST00000544363 COX8CQ7Z4L0 72 aa22.77■■□□□ 1.24
CCM2-219ENST00000544363 LINC00477Q96M19 166 aa22.77■■□□□ 1.24
CCM2-219ENST00000544363 SPAG8Q99932 426 aaPredicted RBP22.77■■□□□ 1.24
CCM2-219ENST00000544363 GPR61Q9BZJ8 451 aa22.77■■□□□ 1.24
CCM2-219ENST00000544363 ZNF492Q9P255 531 aa22.77■■□□□ 1.24
CCM2-219ENST00000544363 NPIPB6E9PJ23 425 aa22.76■■□□□ 1.23
CCM2-219ENST00000544363 F6UB75 175 aa22.75■■□□□ 1.23
CCM2-219ENST00000544363 LINC00322Q6ZN03 302 aaPredicted RBP22.75■■□□□ 1.23
CCM2-219ENST00000544363 NUDT10Q8NFP7 164 aa22.75■■□□□ 1.23
CCM2-219ENST00000544363 NUDT11Q96G61 164 aa22.75■■□□□ 1.23
CCM2-219ENST00000544363 V9GYV3 84 aa22.75■■□□□ 1.23
CCM2-219ENST00000544363 IZUMO1RA6ND01 250 aa22.75■■□□□ 1.23
CCM2-219ENST00000544363 HIST1H1AQ02539 215 aaPredicted RBP22.75■■□□□ 1.23
CCM2-219ENST00000544363 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.75■■□□□ 1.23
CCM2-219ENST00000544363 C19orf71A6NCJ1 209 aa22.73■■□□□ 1.23
CCM2-219ENST00000544363 OR4C46A6NHA9 309 aa22.73■■□□□ 1.23
CCM2-219ENST00000544363 ZNF747Q9BV97 191 aa22.73■■□□□ 1.23
CCM2-219ENST00000544363 URGCP-MRPS24S4R325 110 aa22.73■■□□□ 1.23
CCM2-219ENST00000544363 IGLV1-51P01701 117 aa22.72■■□□□ 1.23
CCM2-219ENST00000544363 CT45A10P0DMU9 189 aa22.72■■□□□ 1.23
CCM2-219ENST00000544363 DAZAP1Q96EP5 407 aaKnown RBP22.72■■□□□ 1.23
CCM2-219ENST00000544363 LENEPQ9Y5L5 61 aa22.72■■□□□ 1.23
CCM2-219ENST00000544363 YPEL4Q96NS1 127 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 ZNF256Q9Y2P7 627 aaPredicted RBP22.71■■□□□ 1.23
CCM2-219ENST00000544363 ATRQ13535 2644 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 ZNF705GA8MUZ8 300 aaPredicted RBP22.71■■□□□ 1.23
CCM2-219ENST00000544363 GATCO43716 136 aaKnown RBP22.71■■□□□ 1.23
CCM2-219ENST00000544363 CRIP1P50238 77 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 SMUG1Q53HV7 270 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 OR2K2Q8NGT1 345 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 IMMP2LQ96T52 175 aa22.71■■□□□ 1.23
CCM2-219ENST00000544363 PFN1P07737 140 aaKnown RBP22.7■■□□□ 1.22
CCM2-219ENST00000544363 ELOBQ15370 118 aa22.7■■□□□ 1.22
CCM2-219ENST00000544363 TENM1Q9UKZ4 2725 aa22.7■■□□□ 1.22
CCM2-219ENST00000544363 COLCA2A8K830 154 aa22.69■■□□□ 1.22
CCM2-219ENST00000544363 GDF5OSQ5U4N7 250 aa22.69■■□□□ 1.22
CCM2-219ENST00000544363 A0A0J9YX75 114 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 P01737 135 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 S100PP25815 95 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 EBLN2Q6P2I7 272 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 IL36BQ9NZH7 164 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 DEFB131AP59861 70 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 FOXI2Q6ZQN5 318 aa22.68■■□□□ 1.22
CCM2-219ENST00000544363 SAV1Q9H4B6 383 aaPredicted RBP22.68■■□□□ 1.22
CCM2-219ENST00000544363 CD33P20138 364 aa22.67■■□□□ 1.22
CCM2-219ENST00000544363 FAM162BQ5T6X4 162 aa22.67■■□□□ 1.22
CCM2-219ENST00000544363 TMEM158Q8WZ71 300 aa22.67■■□□□ 1.22
CCM2-219ENST00000544363 FAM19A4Q96LR4 140 aa22.67■■□□□ 1.22
CCM2-219ENST00000544363 ZNF80P51504 273 aaPredicted RBP22.66■■□□□ 1.22
CCM2-219ENST00000544363 KCNIP4Q6PIL6 250 aa22.66■■□□□ 1.22
CCM2-219ENST00000544363 RPP21Q9H633 154 aaKnown RBP22.66■■□□□ 1.22
CCM2-219ENST00000544363 MAP6D1Q9H9H5 199 aa22.66■■□□□ 1.22
CCM2-219ENST00000544363 TRBV7-9A0A0J9YWB2 115 aa22.65■■□□□ 1.22
CCM2-219ENST00000544363 C3orf56Q8N813 242 aa22.65■■□□□ 1.22
CCM2-219ENST00000544363 OR4B1Q8NGF8 309 aa22.65■■□□□ 1.22
CCM2-219ENST00000544363 SH2D1AO60880 128 aa22.64■■□□□ 1.22
CCM2-219ENST00000544363 SORL1Q92673 2214 aa22.64■■□□□ 1.22
CCM2-219ENST00000544363 DUSP14O95147 198 aaKnown RBP22.64■■□□□ 1.21
CCM2-219ENST00000544363 FAM3BP58499 235 aaPredicted RBP22.64■■□□□ 1.21
CCM2-219ENST00000544363 C12orf54Q6X4T0 127 aa22.64■■□□□ 1.21
CCM2-219ENST00000544363 CA1P00915 261 aaPredicted RBP22.63■■□□□ 1.21
CCM2-219ENST00000544363 CT83Q5H943 113 aa22.63■■□□□ 1.21
CCM2-219ENST00000544363 FBN1P35555 2871 aaKnown RBP22.62■■□□□ 1.21
CCM2-219ENST00000544363 TGIF2-C20orf24A0A0A6YYL0 155 aa22.62■■□□□ 1.21
CCM2-219ENST00000544363 ZFAND2AQ8N6M9 145 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms