RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KLLNB2CW77 178 aa16.48■□□□□ 0.23
CHFR-222ENST00000544093 DEFB130BP0DP73 79 aa16.48■□□□□ 0.23
CHFR-222ENST00000544093 DEFB130AP0DP74 79 aa16.48■□□□□ 0.23
CHFR-222ENST00000544093 FAM19A4Q96LR4 140 aa16.48■□□□□ 0.23
CHFR-222ENST00000544093 AGPAT4-IT1Q9H0P7 198 aa16.48■□□□□ 0.23
CHFR-222ENST00000544093 TRAV12-3A0A0B4J271 114 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 TRBV7-9A0A0J9YWB2 115 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 C7orf71A4D174 169 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 CBY3A6NI87 242 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 CRISP2P16562 243 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 ERCC8Q13216 396 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 PQLC2Q6ZP29 291 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 PHYHIPLQ96FC7 376 aa16.47■□□□□ 0.23
CHFR-222ENST00000544093 RBAKDNA6NC62 111 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 J3KRW8 73 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 ATP5G1P05496 136 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 ATP5G3P48201 142 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 RANP62826 216 aaKnown RBP16.46■□□□□ 0.23
CHFR-222ENST00000544093 POM121L12Q8N7R1 296 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 C15orf53Q8NAA6 179 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 INO80EQ8NBZ0 244 aaPredicted RBP16.46■□□□□ 0.23
CHFR-222ENST00000544093 ZNF503Q96F45 646 aa16.46■□□□□ 0.23
CHFR-222ENST00000544093 GPX1P07203 203 aa16.45■□□□□ 0.22
CHFR-222ENST00000544093 OR2G3Q8NGZ4 309 aa16.45■□□□□ 0.22
CHFR-222ENST00000544093 RXFP4Q8TDU9 374 aa16.45■□□□□ 0.22
CHFR-222ENST00000544093 PSMG3Q9BT73 122 aaPredicted RBP16.45■□□□□ 0.22
CHFR-222ENST00000544093 Q9H3A6 140 aa16.45■□□□□ 0.22
CHFR-222ENST00000544093 NOP10Q9NPE3 64 aaKnown RBP16.45■□□□□ 0.22
CHFR-222ENST00000544093 IGKV2-40A0A087WW87 121 aaPredicted RBP16.44■□□□□ 0.22
CHFR-222ENST00000544093 SNURFLB1AK76 121 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 IGKV2D-40P01614 121 aaPredicted RBP16.44■□□□□ 0.22
CHFR-222ENST00000544093 FAM74A1Q5RGS3 127 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 TMEM88Q6PEY1 159 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 ZNF680Q8NEM1 530 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 LINC00467Q9BRT7 94 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 ZNF492Q9P255 531 aa16.44■□□□□ 0.22
CHFR-222ENST00000544093 MBP02144 154 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 ZNF138P52744 262 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 OR10G4Q8NGN3 311 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 OR10G9Q8NGN4 311 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 OR10G7Q8NGN6 311 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 VGLL1Q99990 258 aa16.43■□□□□ 0.22
CHFR-222ENST00000544093 SERF2P84101 59 aa16.42■□□□□ 0.22
CHFR-222ENST00000544093 RNF212Q495C1 297 aa16.42■□□□□ 0.22
CHFR-222ENST00000544093 ARL6IP6Q8N6S5 226 aa16.42■□□□□ 0.22
CHFR-222ENST00000544093 OTORQ9NRC9 128 aa16.42■□□□□ 0.22
CHFR-222ENST00000544093 EPPK1P58107 5090 aaKnown RBP16.42■□□□□ 0.22
CHFR-222ENST00000544093 F5H768 121 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 ZNF324O75467 553 aaPredicted RBP16.41■□□□□ 0.22
CHFR-222ENST00000544093 RNASE4P34096 147 aaKnown RBP16.41■□□□□ 0.22
CHFR-222ENST00000544093 RAB2AP61019 212 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 DAZ2Q13117 558 aaKnown RBP16.41■□□□□ 0.22
CHFR-222ENST00000544093 UBE2DNLQ8IWF7 75 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 LINC00612Q8N6U2 182 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 HSD17B11Q8NBQ5 300 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 LENEPQ9Y5L5 61 aa16.41■□□□□ 0.22
CHFR-222ENST00000544093 CD300CQ08708 224 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 BTN1A1Q13410 526 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 ANXA2RQ3ZCQ2 193 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 EIF4E3Q8N5X7 224 aaKnown RBP16.4■□□□□ 0.22
CHFR-222ENST00000544093 ZFAND2AQ8N6M9 145 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 OR2T35Q8NGX2 323 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 CMTM2Q8TAZ6 248 aa16.4■□□□□ 0.22
CHFR-222ENST00000544093 ATP6V0CP27449 155 aa16.39■□□□□ 0.21
CHFR-222ENST00000544093 CDC34P49427 236 aaPredicted RBP16.39■□□□□ 0.21
CHFR-222ENST00000544093 Q5BKY6 102 aa16.39■□□□□ 0.21
CHFR-222ENST00000544093 TMED6Q8WW62 240 aa16.39■□□□□ 0.21
CHFR-222ENST00000544093 FXYD6-FXYD2A0A087WZ82 144 aa16.38■□□□□ 0.21
CHFR-222ENST00000544093 BORCS7-ASMTA0A0B4J1R7 106 aa16.38■□□□□ 0.21
CHFR-222ENST00000544093 DIRC3C9JPN6 131 aa16.38■□□□□ 0.21
CHFR-222ENST00000544093 GNPNAT1Q96EK6 184 aaPredicted RBP16.38■□□□□ 0.21
CHFR-222ENST00000544093 TNFSF18Q9UNG2 199 aa16.38■□□□□ 0.21
CHFR-222ENST00000544093 DNAH6Q9C0G6 4158 aa16.37■□□□□ 0.21
CHFR-222ENST00000544093 RGS13O14921 159 aa16.37■□□□□ 0.21
CHFR-222ENST00000544093 FAM3BP58499 235 aaPredicted RBP16.37■□□□□ 0.21
CHFR-222ENST00000544093 RNF222A6NCQ9 220 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 PGPA6NDG6 321 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 STAG3L2P0CL84 134 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 STAG3L3P0CL85 134 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 IBA57Q5T440 356 aaKnown RBP16.36■□□□□ 0.21
CHFR-222ENST00000544093 Q8TAT8 98 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 HYLS1Q96M11 299 aa16.36■□□□□ 0.21
CHFR-222ENST00000544093 ARL14EPLP0DKL9 152 aa16.35■□□□□ 0.21
CHFR-222ENST00000544093 C11orf72Q8NBR9 251 aa16.35■□□□□ 0.21
CHFR-222ENST00000544093 RAB24Q969Q5 203 aa16.35■□□□□ 0.21
CHFR-222ENST00000544093 IGHV1OR15-1A0A075B7D0 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 GAGE12BA1L429 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 GAGE7O76087 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 GAGE12FP0CL80 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 GAGE12GP0CL81 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 GAGE12IP0CL82 117 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 C18orf15Q96N68 181 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 ARPC5LQ9BPX5 153 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 ACTR3CQ9C0K3 210 aaPredicted RBP16.34■□□□□ 0.21
CHFR-222ENST00000544093 GSN-AS1Q9NRJ2 163 aa16.34■□□□□ 0.21
CHFR-222ENST00000544093 SERTM2A0A1B0GWG4 89 aa16.33■□□□□ 0.2
CHFR-222ENST00000544093 TAAR5O14804 337 aa16.33■□□□□ 0.2
CHFR-222ENST00000544093 HMGB3O15347 200 aaKnown RBP16.33■□□□□ 0.2
CHFR-222ENST00000544093 EIF3GO75821 320 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHFR-222ENST00000544093 TCL1AP56279 114 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms