RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 SIGLEC9Q9Y336 463 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 FRYQ5TBA9 3013 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 FRYLO94915 3013 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 TCTEX1D4Q5JR98 221 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 THAP8Q8NA92 274 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
ABCB1-210ENST00000543898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.83□□□□□ -1.323e-7■■■■■ 29.4
ABCB1-210ENST00000543898 IGKV1D-37A0A075B6S9 117 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 H7C2G1 150 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 Q1RN00 199 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 TMEM158Q8WZ71 300 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 PTH2Q96A98 100 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 EYSQ5T1H1 3165 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 H3BMG7 143 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 NDUFS7O75251 213 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 ECSCRQ19T08 205 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 KLF12Q9Y4X4 402 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 DSCAMO60469 2012 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 C19orf71A6NCJ1 209 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 IGHV1-8P0DP01 117 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 GP9P14770 177 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 PSMB2P49721 201 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 SH2D6Q7Z4S9 175 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 TMEM75Q8N9X5 138 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 NPFFR1Q9GZQ6 430 aa6.82□□□□□ -1.32
ABCB1-210ENST00000543898 F5H697 171 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 CRXO43186 299 aaPredicted RBP6.81□□□□□ -1.32
ABCB1-210ENST00000543898 SMIM17P0DL12 118 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 GFRALQ6UXV0 394 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 PRSS22Q9GZN4 317 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 REV3LO60673 3130 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 CGB3P0DN86 165 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 CGB7P0DN87 165 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 JMJD8Q96S16 334 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 ZNF256Q9Y2P7 627 aaPredicted RBP6.81□□□□□ -1.32
ABCB1-210ENST00000543898 TMEM8BA6NDV4 472 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 ATP5LO75964 103 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 LHBP01229 141 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 IGHG3P01860 377 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 GATA3P23771 443 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 FXYD2P54710 66 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 TMEM78Q5T7P6 136 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 ARPC1AQ92747 370 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 VKORC1Q9BQB6 163 aa6.81□□□□□ -1.32
ABCB1-210ENST00000543898 A0A1W2PNU3 283 aaPredicted RBP6.8□□□□□ -1.32
ABCB1-210ENST00000543898 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 M0R381 172 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 NXT2Q9NPJ8 142 aaKnown RBP6.8□□□□□ -1.32
ABCB1-210ENST00000543898 C21orf62Q9NYP8 219 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 IGHV1-3A0A0C4DH29 117 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 TIMM23O14925 209 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 IGFBPL1Q8WX77 278 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 TIMD4Q96H15 378 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 WFDC2Q14508 124 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 VGLL1Q99990 258 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 PSMB11A5LHX3 300 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 TMEM178BH3BS89 294 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 CD59P13987 128 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 GATA1P15976 413 aaPredicted RBP6.8□□□□□ -1.32
ABCB1-210ENST00000543898 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 PPDPFQ9H3Y8 114 aa6.8□□□□□ -1.32
ABCB1-210ENST00000543898 PVRIGQ6DKI7 326 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 Q71RC1 249 aaPredicted RBP6.79□□□□□ -1.32
ABCB1-210ENST00000543898 RAX2Q96IS3 184 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 FAM90A27PA6NNH2 459 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 ERCC8Q13216 396 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 DEFB123Q8N688 67 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 RAXQ9Y2V3 346 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 V9GYY9 64 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 GATA4P43694 442 aa6.79□□□□□ -1.32
ABCB1-210ENST00000543898 HOXA3O43365 443 aaPredicted RBP6.78□□□□□ -1.32
ABCB1-210ENST00000543898 RUSC1-AS1Q66K80 236 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 SEC61GP60059 68 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 FOXE3Q13461 319 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
ABCB1-210ENST00000543898 CD3EP07766 207 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 PRTN3P24158 256 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 HLA-DMBP28068 263 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 C8orf86Q6ZUL3 223 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 IGLV3-9A0A075B6K5 115 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
ABCB1-210ENST00000543898 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms