RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 PAXXQ9BUH6 204 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
NUP43-206ENST00000543637 WDR61Q9GZS3 305 aaKnown RBP5.04□□□□□ -1.6
NUP43-206ENST00000543637 PTTG2Q9NZH5 202 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 OR5AC2Q9NZP5 309 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 NACAE9PAV3 2078 aa5.04□□□□□ -1.6
NUP43-206ENST00000543637 A0A1W2PPV4 95 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 A6NHS1 94 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 M0R3E3 92 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 RGS13O14921 159 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 OR7C2O60412 319 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 M6PRP20645 277 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 RANP62826 216 aaKnown RBP5.03□□□□□ -1.6
NUP43-206ENST00000543637 KIR3DS1Q14943 382 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 Q6ZR54 194 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 MIR17HGQ75NE6 70 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 LYPD1Q8N2G4 141 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 RXFP4Q8TDU9 374 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 PPP1R1CQ8WVI7 109 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 ATP5SQ99766 215 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 ARPC5LQ9BPX5 153 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 MARVELD1Q9BSK0 173 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 AGPAT4-IT1Q9H0P7 198 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 BATF3Q9NR55 127 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
NUP43-206ENST00000543637 TRAV26-1A0A087WT03 109 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 A0A0J9YY99 117 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 H3BNG1 76 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 RTL8CO15255 209 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 NDUFB4O95168 129 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 MPC2O95563 127 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 OR10J4P0C629 311 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 RPL12P30050 165 aaKnown RBP5.02□□□□□ -1.61
NUP43-206ENST00000543637 ZNF138P52744 262 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 DAZ2Q13117 558 aaKnown RBP5.02□□□□□ -1.61
NUP43-206ENST00000543637 SLAQ13239 276 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 ACOT6Q3I5F7 207 aaPredicted RBP5.02□□□□□ -1.61
NUP43-206ENST00000543637 ANXA2RQ3ZCQ2 193 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 KHDC3LQ587J8 217 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 FFAR4Q5NUL3 377 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 SSX7Q7RTT5 188 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 CMTM2Q8TAZ6 248 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 ZNF503Q96F45 646 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 LINC00467Q9BRT7 94 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 Q9H8V8 135 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 GSN-AS1Q9NRJ2 163 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 ZNF492Q9P255 531 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 HSPB11Q9Y547 144 aa5.02□□□□□ -1.61
NUP43-206ENST00000543637 DNAH1Q9P2D7 4330 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 IGKV2-40A0A087WW87 121 aaPredicted RBP5.01□□□□□ -1.61
NUP43-206ENST00000543637 TRGV1A0A0A0MS02 117 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 NBDYA0A0U1RRE5 68 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 RBAKDNA6NC62 111 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 KLLNB2CW77 178 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 H0YIZ8 118 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 ZNF324O75467 553 aaPredicted RBP5.01□□□□□ -1.61
NUP43-206ENST00000543637 IGKV2D-40P01614 121 aaPredicted RBP5.01□□□□□ -1.61
NUP43-206ENST00000543637 CRISP2P16562 243 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 IFITM3Q01628 133 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 CD300CQ08708 224 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 TTC32Q5I0X7 151 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
NUP43-206ENST00000543637 FAM159AQ6UWV7 190 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 Q6ZTI0 123 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 LINC00612Q8N6U2 182 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 SMIM3Q9BZL3 60 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 LINC00588Q9Y4M8 146 aa5.01□□□□□ -1.61
NUP43-206ENST00000543637 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
NUP43-206ENST00000543637 PGPA6NDG6 321 aa5□□□□□ -1.61
NUP43-206ENST00000543637 PAX4O43316 350 aa5□□□□□ -1.61
NUP43-206ENST00000543637 MED14OSP0DP75 135 aa5□□□□□ -1.61
NUP43-206ENST00000543637 TCL1AP56279 114 aa5□□□□□ -1.61
NUP43-206ENST00000543637 H2BFSP57053 126 aa5□□□□□ -1.61
NUP43-206ENST00000543637 UBE2L3P68036 154 aaKnown RBP5□□□□□ -1.61
NUP43-206ENST00000543637 ZNF415Q09FC8 603 aa5□□□□□ -1.61
NUP43-206ENST00000543637 BTN1A1Q13410 526 aa5□□□□□ -1.61
NUP43-206ENST00000543637 ZNRF2Q8NHG8 242 aa5□□□□□ -1.61
NUP43-206ENST00000543637 FXYD5Q96DB9 178 aa5□□□□□ -1.61
NUP43-206ENST00000543637 FAM167A-AS1Q96KT0 104 aa5□□□□□ -1.61
NUP43-206ENST00000543637 FAM19A4Q96LR4 140 aa5□□□□□ -1.61
NUP43-206ENST00000543637 HYLS1Q96M11 299 aa5□□□□□ -1.61
NUP43-206ENST00000543637 VGLL1Q99990 258 aa5□□□□□ -1.61
NUP43-206ENST00000543637 SPXQ9BT56 116 aa5□□□□□ -1.61
NUP43-206ENST00000543637 Q9H3A6 140 aa5□□□□□ -1.61
NUP43-206ENST00000543637 MBD2Q9UBB5 411 aa5□□□□□ -1.61
NUP43-206ENST00000543637 KLF12Q9Y4X4 402 aa5□□□□□ -1.61
NUP43-206ENST00000543637 LENEPQ9Y5L5 61 aa5□□□□□ -1.61
NUP43-206ENST00000543637 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
NUP43-206ENST00000543637 PLECQ15149 4684 aaKnown RBP4.99□□□□□ -1.61
NUP43-206ENST00000543637 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
NUP43-206ENST00000543637 TRGV4A0A0C4DH28 118 aa4.99□□□□□ -1.61
NUP43-206ENST00000543637 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
NUP43-206ENST00000543637 DIRC3C9JPN6 131 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms