RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 SPATA12Q7Z6I5 190 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 STX12Q86Y82 276 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 FAM19A4Q96LR4 140 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 TMEM14CQ9P0S9 112 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 HBG1P69891 147 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 HBG2P69892 147 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 CD300CQ08708 224 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 ZNF680Q8NEM1 530 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 CHAC2Q8WUX2 184 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
CACNA1C-230ENST00000543114 ZNF324O75467 553 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 H2AFB2P0C5Z0 115 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 HIST1H1EP10412 219 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 PDE6HQ13956 83 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 AGPAT4-IT1Q9H0P7 198 aa13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 GPN1Q9HCN4 374 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-230ENST00000543114 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 IGKV2-40A0A087WW87 121 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 A0A096LPF7 62 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 A0A1W2PPQ1 181 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 IGKV2D-40P01614 121 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 PRELID1Q9Y255 219 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
CACNA1C-230ENST00000543114 TRGV1A0A0A0MS02 117 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 ANXA2RQ3ZCQ2 193 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 PRR9Q5T870 116 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 EIF4E3Q8N5X7 224 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 LINC00477Q96M19 166 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 SLC25A2Q9BXI2 301 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 FUT9Q9Y231 359 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 KLF12Q9Y4X4 402 aa13.52□□□□□ -0.25
CACNA1C-230ENST00000543114 CRISP2P16562 243 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 RNASE4P34096 147 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 KRTAP10-2P60368 255 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 ATP6V1FQ16864 119 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 ZFAND2AQ8N6M9 145 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 THAP6Q8TBB0 222 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 CCDC32Q9BV29 185 aa13.51□□□□□ -0.25
CACNA1C-230ENST00000543114 MPDU1O75352 247 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 TCL1AP56279 114 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 ICAM4Q14773 271 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 Q6ZQT7 251 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 C9orf47Q6ZRZ4 202 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 AAMDCQ9H7C9 122 aa13.5□□□□□ -0.25
CACNA1C-230ENST00000543114 FAM240BA0A1B0GVZ2 78 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 SPINK4O60575 86 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 GPX1P07203 203 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 LINC00315P59091 139 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 VGLL1Q99990 258 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 TP53TG3Q9ULZ0 132 aa13.49□□□□□ -0.25
CACNA1C-230ENST00000543114 NHLH2Q02577 135 aa13.48□□□□□ -0.25
CACNA1C-230ENST00000543114 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-230ENST00000543114 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
CACNA1C-230ENST00000543114 MRPL16Q9NX20 251 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-230ENST00000543114 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
CACNA1C-230ENST00000543114 NMBP08949 121 aa13.47□□□□□ -0.25
CACNA1C-230ENST00000543114 TMEM78Q5T7P6 136 aa13.47□□□□□ -0.25
CACNA1C-230ENST00000543114 Q8TAT8 98 aa13.47□□□□□ -0.25
CACNA1C-230ENST00000543114 ST6GAL2Q96JF0 529 aa13.47□□□□□ -0.25
CACNA1C-230ENST00000543114 RGS13O14921 159 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 SIX6O95475 246 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 Q6ZRN7 208 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 Q8N1X5 172 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 PHYHIPLQ96FC7 376 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 OR5AC2Q9NZP5 309 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 ZNF492Q9P255 531 aa13.46□□□□□ -0.25
CACNA1C-230ENST00000543114 IGHV1OR15-1A0A075B7D0 117 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 OR10J4P0C629 311 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 NBEAP1P0C6P0 100 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 FXYD5Q96DB9 178 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 ICOSQ9Y6W8 199 aa13.45□□□□□ -0.26
CACNA1C-230ENST00000543114 SIVA1O15304 175 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 PAX4O43316 350 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 ASAH1Q13510 395 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 PAXXQ9BUH6 204 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 NDUFA13Q9P0J0 144 aa13.44□□□□□ -0.26
CACNA1C-230ENST00000543114 H0YIZ8 118 aa13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 NXPH4O95158 308 aa13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 ZNF138P52744 262 aa13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 SLC25A31Q9H0C2 315 aa13.43□□□□□ -0.26
CACNA1C-230ENST00000543114 E5RGE8 158 aa13.42□□□□□ -0.26
CACNA1C-230ENST00000543114 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
CACNA1C-230ENST00000543114 KCNIP2Q9NS61 270 aa13.42□□□□□ -0.26
CACNA1C-230ENST00000543114 PRO0255Q9UI72 69 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms