RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 ERCC8Q13216 396 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 MORN3Q6PF18 240 aaPredicted RBP8.52□□□□□ -1.05
YBX3-213ENST00000542641 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 CCDC28AQ8IWP9 274 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 KIR2DL5AQ8N109 375 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 LINC00477Q96M19 166 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 VGLL1Q99990 258 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 AGPAT4-IT1Q9H0P7 198 aa8.52□□□□□ -1.05
YBX3-213ENST00000542641 SERTM2A0A1B0GWG4 89 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 A8MTW9 85 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 F6UZH7 168 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 PEX7O00628 323 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 CA1P00915 261 aaPredicted RBP8.51□□□□□ -1.05
YBX3-213ENST00000542641 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 BCL2P10415 239 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
YBX3-213ENST00000542641 FXYD7P58549 80 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 CYB561D1Q8N8Q1 229 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
YBX3-213ENST00000542641 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 RBFOX3A6NFN3 312 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 UBE2CO00762 179 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 ZNF138P52744 262 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 MEF2BQ02080 365 aaPredicted RBP8.5□□□□□ -1.05
YBX3-213ENST00000542641 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 ASCL2Q99929 193 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 RARRES2Q99969 163 aa8.5□□□□□ -1.05
YBX3-213ENST00000542641 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 M0R2Z0 102 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 TSPOP30536 169 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 Q8TAT8 98 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 C1QTNF4Q9BXJ3 329 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
YBX3-213ENST00000542641 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 XCL2Q9UBD3 114 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 AGRNO00468 2067 aa8.49□□□□□ -1.05
YBX3-213ENST00000542641 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
YBX3-213ENST00000542641 PDE6DO43924 150 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 AMBPP02760 352 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 GIG44P09565 113 aaPredicted RBP8.48□□□□□ -1.05
YBX3-213ENST00000542641 LEPP41159 167 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 CDKN1BP46527 198 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 FLI1Q01543 452 aaPredicted RBP8.48□□□□□ -1.05
YBX3-213ENST00000542641 TOR2AQ5JU69 321 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 ZNF506Q5JVG8 444 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 Q6ZWC4 215 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 PRNTQ86SH4 94 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 FAM210AQ96ND0 272 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 PSG8Q9UQ74 426 aa8.48□□□□□ -1.05
YBX3-213ENST00000542641 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 J3KRW8 73 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 AKR1C3P42330 323 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 UBE2G1P62253 170 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 DEFB135Q30KP9 77 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 FMC1Q96HJ9 113 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 NDFIP1Q9BT67 221 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 MED9Q9NWA0 146 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 LENEPQ9Y5L5 61 aa8.47□□□□□ -1.05
YBX3-213ENST00000542641 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 RGS13O14921 159 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 EREGO14944 169 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 S100A9P06702 114 aaKnown RBP8.46□□□□□ -1.06
YBX3-213ENST00000542641 GPX1P07203 203 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 CRISP2P16562 243 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 KIR3DS1Q14943 382 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 TMEM183BQ1AE95 376 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 C11orf52Q96A22 123 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 RCHY1Q96PM5 261 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 TREM1Q9NP99 234 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 KLF12Q9Y4X4 402 aa8.46□□□□□ -1.06
YBX3-213ENST00000542641 CRXO43186 299 aaPredicted RBP8.45□□□□□ -1.06
YBX3-213ENST00000542641 SPRY2O43597 315 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 INSP01308 110 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
YBX3-213ENST00000542641 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 GFI1BQ5VTD9 330 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms