RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 POLR2GP62487 172 aaKnown RBP eCLIP7.82□□□□□ -1.16
COPA-205ENST00000541366 MRPS10P82664 201 aaKnown RBP7.82□□□□□ -1.16
COPA-205ENST00000541366 TMEM37Q8WXS4 190 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 SCGB3A2Q96PL1 93 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 PSENENQ9NZ42 101 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 PXMP4Q9Y6I8 212 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 MPDU1O75352 247 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 OR4E1P0C645 316 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 METTL15P1P0C7V9 234 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 VAMP1P23763 118 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 IL18Q14116 193 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 CTF1Q16619 201 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 IBA57Q5T440 356 aaKnown RBP7.81□□□□□ -1.16
COPA-205ENST00000541366 S100A7AQ86SG5 101 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 LRTM2Q8N967 370 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 FAM19A4Q96LR4 140 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 AGPAT4-IT1Q9H0P7 198 aa7.81□□□□□ -1.16
COPA-205ENST00000541366 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
COPA-205ENST00000541366 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 IBA57-AS1B1ANH7 110 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 K7EPK0 472 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 GOSR2O14653 212 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 COX7A2P2O60397 106 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 TMEM128Q5BJH2 165 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 BLNKQ8WV28 456 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 PCNPQ8WW12 178 aaKnown RBP7.8□□□□□ -1.16
COPA-205ENST00000541366 NPVFQ9HCQ7 196 aa7.8□□□□□ -1.16
COPA-205ENST00000541366 CCDC59Q9P031 241 aaKnown RBP7.8□□□□□ -1.16
COPA-205ENST00000541366 RGS13O14921 159 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 AGPAT2O15120 278 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 CTDSPLO15194 276 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 SSSCA1O60232 199 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 IGHV3-30P01768 117 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 IGHV3-33P01772 117 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 GPX1P07203 203 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 IGHV3-30-3P0DP02 117 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 IGHV3-30-5P0DP03 117 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 ID3Q02535 119 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 ZFAND2AQ8N6M9 145 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 OR10P1Q8NGE3 313 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 DIRAS2Q96HU8 199 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
COPA-205ENST00000541366 TNXBP22105 4242 aa7.79□□□□□ -1.16
COPA-205ENST00000541366 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
COPA-205ENST00000541366 PPP1R1AQ13522 171 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 LINC01556Q5JQF7 62 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 PXDC1Q5TGL8 231 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 C10orf113Q5VZT2 155 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 MGST2Q99735 147 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 ARPC5LQ9BPX5 153 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 RNF24Q9Y225 148 aa7.78□□□□□ -1.16
COPA-205ENST00000541366 IGKV2-40A0A087WW87 121 aaPredicted RBP7.77□□□□□ -1.17
COPA-205ENST00000541366 NDUFB4O95168 129 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 SFT2D2O95562 160 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 IGKV2D-40P01614 121 aaPredicted RBP7.77□□□□□ -1.17
COPA-205ENST00000541366 CRISP2P16562 243 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 C4orf46Q504U0 113 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 MUC21Q5SSG8 566 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 TMEM14EPQ6UXP3 125 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 ZNF546Q86UE3 836 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 IQCF2Q8IXL9 164 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 Q8N3U1 123 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 NHLRC2Q8NBF2 726 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 OR10G4Q8NGN3 311 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 LINC00477Q96M19 166 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 SOSTQ9BQB4 213 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
COPA-205ENST00000541366 SSBP4Q9BWG4 385 aaPredicted RBP7.77□□□□□ -1.17
COPA-205ENST00000541366 IGHV3-16A0A0C4DH30 117 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 ORM1P02763 201 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 PPT1P50897 306 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 EXOC3-AS1Q8N2X6 119 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 SMIM8Q96KF7 97 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 MGAT4CQ9UBM8 478 aa7.76□□□□□ -1.17
COPA-205ENST00000541366 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 PIGBOS1A0A0B4J2F0 54 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 C9JCJ5 164 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 FNDC10F2Z333 226 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 IGLV2-8P01709 118 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 SPCS2Q15005 226 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 GUK1Q16774 197 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 OR10J3Q5JRS4 329 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 MIC13Q5XKP0 118 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
COPA-205ENST00000541366 SLC25A31Q9H0C2 315 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
COPA-205ENST00000541366 ZNF253O75346 499 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 PYYP10082 97 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 C9orf47Q6ZRZ4 202 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 Q8TAT8 98 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 RASL10AQ92737 203 aa7.74□□□□□ -1.17
COPA-205ENST00000541366 SRRQ9GZT4 340 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms